Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01894 ATGCAGAAGCGAAAGTGTGTTTCGGTGGTGCAACTGAGGAAGCTTCTTACTGCAGCAATATGCTCAATAGCGTTCATGGCTCTTGTCTCTGTTCATGTCCAGCACGTCGTTCCTTCTTCCAATGATCAGAAGTTCAATGACAAGATCACAACGACTCGAGATCTGCAAAGGTGGACAAGAGAGCTGGCTCCGCCTCATTTATCAAAAGTTCTGTTTCCTCCTCCAAAGTCGAACGTTTCAAGAGGGGTTTCGGATTATGAGAAGTTGTGGAAGCCTCCATCCAATCGTGGGTATCTGCCCTGTACAAAGCCTACACCTAATTATACAGCTCCTGCTGAGTCAAGAGGATACCTTCTAGTTCATACAAATGGTGGTCTCAATCAAATGCGTGCTGGGATATGTGATATGGTAGCTGTAGCTCGTATAATAAATGCCACTCTTGTAGTTCCTGAACTTGATAAAAGATCATTTTGGCAAGACACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATACGTTCTCTAGCTAATGATGTGAAGATAATTAAGAAGCTTCCCCAAGAACTGGTTAATGAAACCAGAATTGTGAAGTACTTCATAAGCTGGTCTGGTATGGATTATTATGAGAATGAGATTGCTACCTTGTGGGAAGAATACCAAGTTATTAGAGCAGCAAAATCTGATTCACGTTTAGCAAACAACAACCTACCTGCAGACATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTCCGATTTTCACCTTGCATTGAACAAATGGGAAAATTGTTGGTGGAAAGGATGAGGTTATTTGGTCCTTATGTTGCACTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGATGCACACATGATTTATCTCAAGATGAGGCTGAAGAGCTACGGATAATCAGAGAGAACACTTCATATTGGAAAATAAAGGAAATTGATCCCGTAGAACAAAGGTTGAAAGGATTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGATATACGGCGGTGAGTCCCATATGGCTGAACTGCGTTCCCGCTATCCATTGCTAATGAGCAAGGTAAAGTGTTGCAATCATGTGTTACGATAG 1173 0.4177 MQKRKCVSVVQLRKLLTAAICSIAFMALVSVHVQHVVPSSNDQKFNDKITTTRDLQRWTRELAPPHLSKVLFPPPKSNVSRGVSDYEKLWKPPSNRGYLPCTKPTPNYTAPAESRGYLLVHTNGGLNQMRAGICDMVAVARIINATLVVPELDKRSFWQDTSNFSDVFDEEHFIRSLANDVKIIKKLPQELVNETRIVKYFISWSGMDYYENEIATLWEEYQVIRAAKSDSRLANNNLPADIQKLRCRACYEALRFSPCIEQMGKLLVERMRLFGPYVALHLRYEKDMLAFSGCTHDLSQDEAEELRIIRENTSYWKIKEIDPVEQRLKGFCPLTPKEVGIFLTALGYPSKTPIYIASGGIYGGESHMAELRSRYPLLMSKVKCCNHVLR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01894 390 PIRSF UCP009360 1 387 IPR024709 -
Aip07g01894 390 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 384 - -
Aip07g01894 390 CDD O-FucT_plant 117 381 IPR024709 -
Aip07g01894 390 Pfam GDP-fucose protein O-fucosyltransferase 117 382 IPR019378 -
Aip07g01894 390 PANTHER OS02G0726500 PROTEIN-RELATED 4 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01894 Aip-Chr7 47164426 47169875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01894 38 383 Miscellaneous Gene Families AT1G22460 66.474 1.59e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01894 - - gmx:100795727 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01894 07 47164426 47169875 Aip07g01894 07 47164426 47169875 ECH
Aip07g01894 07 47164426 47169875 Aip07g01894 07 47164426 47169875 PCT