Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01806 ATGGCCTCCAATTCACACAGGGCGGCTCCTTTCTACGGCGTCGCTGCCCCTTTCCGGTCAAGAGATGGGCTTAGCACAAGGGCAGTATCGGGGACCGACGAGATCCAATTGCGAATTGATCCCTTCGACTTGGAGGACGAGATCACCGGTCTTCATACCCAAGTTCGAAGGTTGAAACATGTTGCAAACGAGATAGGCACAGAAGTAAAGTATCAAAAGGATTTTTTGGAACAAGTGCAAATGGGAATAATGAAGGCTCAGGTAGGGGTGAAGAATAATATGAGAAGATTGAACAAGGCCGTCATTAAAAGTGGCTCGAATCACATTCTTCATATCGTTACATTTGGTTTAGTTTTGTTTCTCATAGTATACCTTTGGTCCAAGATTTCCAGAAAATGA 399 0.4461 MASNSHRAAPFYGVAAPFRSRDGLSTRAVSGTDEIQLRIDPFDLEDEITGLHTQVRRLKHVANEIGTEVKYQKDFLEQVQMGIMKAQVGVKNNMRRLNKAVIKSGSNHILHIVTFGLVLFLIVYLWSKISRK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01806 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Aip07g01806 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
Aip07g01806 132 Gene3D - 45 100 - -
Aip07g01806 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Aip07g01806 132 CDD SNARE_Qc 43 99 - -
Aip07g01806 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 46 100 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01806 Aip-Chr7 41637495 41640202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01806 K08505 - gmx:100306642 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01806 07 41637495 41640202 Aip07g01806 07 41637495 41640202 ECH
Aip07g01806 07 41637495 41640202 Aip07g01806 07 41637495 41640202 PCT