Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01711 ATGATTTGTAAGGGTTGTTCCCCTAGTGTTGTTACTTTCAATATCTTGATTAGTTTCCTCTGCCAAAAAGGCTTGTTGGGCCAAGCCATTGATATATTGAAGATGATGCCTAAGCATGGTTGTTTGCCTAATCCCAGGAGTTACAATCCATTGCTTCAAGGGTTTTGTTATGTAAATAAGATTGATAGAGCAATTGAATACTTGGAAATAATGGTAAATAAGGGTTGTCACCCAAATATAGTGACCTATAATATCTTGCTGTTAGCATTATGCAAAGATGGGAGGGTGGATGATGCAGCTGAAATAATGAACCAACTCAGTTGCAAAGGGTGTTCTCCCAGTCGAGTCACTTATAATATAGTAATTTATGGGCTTTTAAATGTGGGAAAAACAGAGAATGCAATGGAACTCTTCAAAGAGATGTGCCGAAAAGGTCTTAAACCTGATAAAGTTTCTTACAATACGCTCATTGATGGGCTTTTAAAGGCAGGAAAGACAGATCTTGCTATGGAACTCTTCGAGAAGATGCGCACAAGAGGTCCTAAACCTGATACAATTACTTACACTTCACTAGTTAGGGGTCTTAGCCGCAAAGGAAAGGTTCGTGAAGCAATCAAGTTTCTACATGACTTGGAAGCATTGGGTTTCAGGCCTAATGTGTTCTTTTATAACTCAGTCATGAAGGGGCTCTGTAAAGCTCAGCAAACCAGTGCTGCCATCGATTTTCTGGCTCGTATGACAGCCAAGGGATGTAAACCAAGTGAGGATACATATAAGATTCTTGTGGAAGGAATTGCTTGTGAGGGATTAGTTAAGGAGGCTTTGGGATTATTAAATGTGTTGTGCTATGGAAGATTTGTGAGGAAAAGTTTGGCTGAAAAGGTAGCAATGAATATATATAGAATACATCAACAACTAGAGCAACCACTAAGTGTTATCTCTCAAACCTATAATTTAGTTAATGTAGCACCTTCAAACAAATCAACTCATACCTCCAGTTGCTTGTCTTGA 1011 0.3877 MICKGCSPSVVTFNILISFLCQKGLLGQAIDILKMMPKHGCLPNPRSYNPLLQGFCYVNKIDRAIEYLEIMVNKGCHPNIVTYNILLLALCKDGRVDDAAEIMNQLSCKGCSPSRVTYNIVIYGLLNVGKTENAMELFKEMCRKGLKPDKVSYNTLIDGLLKAGKTDLAMELFEKMRTRGPKPDTITYTSLVRGLSRKGKVREAIKFLHDLEALGFRPNVFFYNSVMKGLCKAQQTSAAIDFLARMTAKGCKPSEDTYKILVEGIACEGLVKEALGLLNVLCYGRFVRKSLAEKVAMNIYRIHQQLEQPLSVISQTYNLVNVAPSNKSTHTSSCLS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 9 43 IPR002885 -
Aip07g01711 336 Gene3D Tetratricopeptide repeat domain 1 105 IPR011990 GO:0005515
Aip07g01711 336 Gene3D Tetratricopeptide repeat domain 106 212 IPR011990 GO:0005515
Aip07g01711 336 Gene3D Tetratricopeptide repeat domain 213 282 IPR011990 GO:0005515
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Aip07g01711 336 SUPERFAMILY HCP-like 57 250 - -
Aip07g01711 336 PANTHER OS02G0565400 PROTEIN 151 298 - -
Aip07g01711 336 PANTHER OS02G0565400 PROTEIN 1 153 - -
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 149 183 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 151 185 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 116 149 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 47 80 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 186 220 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 223 255 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 81 114 IPR002885 -
Aip07g01711 336 TIGRFAM PPR: pentatricopeptide repeat domain 11 44 IPR002885 -
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 184 218 IPR002885 -
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 79 113 IPR002885 -
Aip07g01711 336 PANTHER ATPASE EXPRESSION PROTEIN 3 151 298 - -
Aip07g01711 336 PANTHER ATPASE EXPRESSION PROTEIN 3 1 153 - -
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 44 78 IPR002885 -
Aip07g01711 336 Pfam PPR repeat family 78 126 IPR002885 -
Aip07g01711 336 Pfam PPR repeat family 218 265 IPR002885 -
Aip07g01711 336 Pfam PPR repeat family 150 196 IPR002885 -
Aip07g01711 336 Pfam PPR repeat family 8 56 IPR002885 -
Aip07g01711 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 114 148 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01711 1 308 Glycosyltransferase AT1G05670 29.450 5.88e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01711 - - adu:107459331 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01711 07 35279502 35280512 Aip07g01711 07 35279502 35280512 ECH