Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01706 ATGGCATCATTTCCTTCTGCTTCTGCTGCTCTCATTACAACTCTTAAGCTCCAACCACAATTCAAAACACACCCACCAACCTCCCTTCCCATAGAAAAGAGTCAGGGCATTTCTTTGCAGAAAAGCAACTACTTCACGGATTTGGATCCCAAGAATCTTGATTTTCGTGAAACGATCTCGTTGACAAAACAAATGACAGAGCTGGACTCATCTTTCTATTTTCCCCTGTTGCAAGAATGCTTAGACAGGACATCTTTCCTGGATGCACAAGTTATTCATGGTCATGCCATTAAAACCGGAGCGCACCAAGATGTTTTCTTGATGTCATTTCTGGTCAATGTTTATGCTAAATGTGGTCGCATGGAAGCCGCACGCAAAGTATTCGACAAAATGCCAAGGAGAAATGTGGTGGGTTGGACTACATTGATGGTGGGTTATGTGCAGAAAATGCAGCCAGAGAATGCTATTTATGTGTTCCAAGAGATGTTGTATGCAGGGAGTTATCCTTCCAATTACACACTTGCCGTAGCTGTAAGCGCTTGTACATCAATGCGATCAGTTAAGTTAGGGAATCAGTTCCATGCTTACATAATCAAATACCAGATTGATTTTGACACTAGCATTTGCAATGCACTTTGTAGTTTATACTCCAAATGTGGCAAATTGAAATTAGCTCTCAGTGCATTTAGGAGAATCAAGGAAAAGAATGTTGTTTCTTGGACTGCTGCTATTTCTGCTTGTGGGGACAATGGTGACCCAATGACGGGTTTAAGACTTTTCGTTGATATGCTTTCTGAGGACACACAGCCTAATGAGTTAACTTTATCCAGTGTCTTGAGCCAGTGTTGTGAGATTCCATTATTAGAACTCGGGACTCAGGTTCATTCGCTGTCTGCTAAATTAGGATACCAGTCGAATCTGCGTATAAGGAATTCTTTATTGTATTTGTATCTCAAGTGTGGTTGCATTGATGAGGCACAAATTTTGTTTAGCGGAATGGATGATGTTAGTTTGGTTTCATGGAATGCAATGATTGCTGGGCATGCACAAATGATGGAGCTCACAAAGGATAATATTTCTGCTTGCCACTATGGAATTGAAGCACTCAAACTTTTCTCTGAGTTGCATCGGTTTGGCATGAAGCCAGACCTGTTTACCTTCTCAAGTGCCTTATGTGTCTGTAGTAGGATGGTGGCTTTAGAGCAGGGGGAACAGATTCATGCTCAGGCCATCAAAATCGGGTTCCTATCGGAAGTGGTAGTGGGGAGTTCACTGATTAATATGTACAATAAATGTGGAAGTATTGAGAGGGCAAGCAAAGCATTTCTAGAGATGTCTACTAGGACTATGATATCATGGACTTCCATGATTACAGCTTTTTCACAGCATGGTTGGTCTCAGCAAGCGTTGGAGCTTTTTGAGGACATGAAACTAACAGGAGTTAGACCAAACGCAGTCACTTTTGTTGGGGTTTTATCTGCTTGTCGCCATGCTGGCATGATCAGTGCGGCACTCACTTATTTTGAGATTATGCAGAAGGAGTACAAAATCATGCCTGTGATGGACCATTATGTTTGCCTTGTTGATTTGTTTGTGAAGTTTGGACGTCTAGACGAAGCTTTCAATATGATTAAGAAAATGGATTTCGAGCCTAGCGAGTATATCTTGTCAAACTTGGTAGCAGGTTGCCGAAGCCACGGTAATCAGGAGTTGGGGTTTCAAGCTGCCGAGCAGTTACTAAGTCATAAACCGAAAGATACCGAAACATATTTGTTGTTATTGGATATGTACCATTCTGTAGAGAGATTTGAGGATGTTTCTAGGGTGAAGAAGATAATGAAGGAGGAAAAAGAATTCCCTCAGAGTTCTCTAGTTTATGAATCATTGGAGGTTTTAATTTTCAAAGCAAAGAATCTTGGATATGAGATGCTAGAAACTATGGAGATAAGTGAAGAAGACAAGGAAGAAGAAGAAAAAATAACATCAACTTCCATTTATCACAGTGAGAAGCTGGCGATTACATTCGGATTGGAGAACTTGCCGAGTTCCTCGCCGATACGAGTAGTGAAGAGTACCTTAATGTGCAGAGATGGCCATGATTTTGTTAACGAAGAGAAAAGAAAAATGATATTGAGGATTCTTCCCCCACTCAAGAGGCCATGCGCCGACTCCGACTTCGACGCCAATTGTCAGCTTGTTATCTACGAGGATCCTCCTCCACCGACGTCTTTGCCTGAGTTGGCGGTACAGAAATTGGAGAATAAGAGTGGAGCTTAG 2277 0.4172 MASFPSASAALITTLKLQPQFKTHPPTSLPIEKSQGISLQKSNYFTDLDPKNLDFRETISLTKQMTELDSSFYFPLLQECLDRTSFLDAQVIHGHAIKTGAHQDVFLMSFLVNVYAKCGRMEAARKVFDKMPRRNVVGWTTLMVGYVQKMQPENAIYVFQEMLYAGSYPSNYTLAVAVSACTSMRSVKLGNQFHAYIIKYQIDFDTSICNALCSLYSKCGKLKLALSAFRRIKEKNVVSWTAAISACGDNGDPMTGLRLFVDMLSEDTQPNELTLSSVLSQCCEIPLLELGTQVHSLSAKLGYQSNLRIRNSLLYLYLKCGCIDEAQILFSGMDDVSLVSWNAMIAGHAQMMELTKDNISACHYGIEALKLFSELHRFGMKPDLFTFSSALCVCSRMVALEQGEQIHAQAIKIGFLSEVVVGSSLINMYNKCGSIERASKAFLEMSTRTMISWTSMITAFSQHGWSQQALELFEDMKLTGVRPNAVTFVGVLSACRHAGMISAALTYFEIMQKEYKIMPVMDHYVCLVDLFVKFGRLDEAFNMIKKMDFEPSEYILSNLVAGCRSHGNQELGFQAAEQLLSHKPKDTETYLLLLDMYHSVERFEDVSRVKKIMKEEKEFPQSSLVYESLEVLIFKAKNLGYEMLETMEISEEDKEEEEKITSTSIYHSEKLAITFGLENLPSSSPIRVVKSTLMCRDGHDFVNEEKRKMILRILPPLKRPCADSDFDANCQLVIYEDPPPPTSLPELAVQKLENKSGA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01706 758 Pfam PPR repeat 110 136 IPR002885 -
Aip07g01706 758 Pfam PPR repeat 311 333 IPR002885 -
Aip07g01706 758 Pfam PPR repeat 139 166 IPR002885 -
Aip07g01706 758 Pfam PPR repeat 524 547 IPR002885 -
Aip07g01706 758 Pfam PPR repeat 423 446 IPR002885 -
Aip07g01706 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 483 IPR002885 -
Aip07g01706 758 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 68 617 - -
Aip07g01706 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 104 138 IPR002885 -
Aip07g01706 758 SUPERFAMILY TPR-like 104 605 IPR011990 GO:0005515
Aip07g01706 758 MobiDBLite consensus disorder prediction 739 758 - -
Aip07g01706 758 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 236 270 IPR002885 -
Aip07g01706 758 TIGRFAM PPR: pentatricopeptide repeat domain 111 137 IPR002885 -
Aip07g01706 758 TIGRFAM PPR: pentatricopeptide repeat domain 451 485 IPR002885 -
Aip07g01706 758 TIGRFAM PPR: pentatricopeptide repeat domain 238 272 IPR002885 -
Aip07g01706 758 Pfam PPR repeat family 235 283 IPR002885 -
Aip07g01706 758 Pfam PPR repeat family 451 495 IPR002885 -
Aip07g01706 758 Pfam DYW family of nucleic acid deaminases 652 703 IPR032867 GO:0008270
Aip07g01706 758 PANTHER OS01G0913400 PROTEIN-RELATED 68 617 - -
Aip07g01706 758 Pfam E motif 566 616 IPR046848 -
Aip07g01706 758 Gene3D Tetratricopeptide repeat domain 289 395 IPR011990 GO:0005515
Aip07g01706 758 Gene3D Tetratricopeptide repeat domain 503 673 IPR011990 GO:0005515
Aip07g01706 758 Gene3D Tetratricopeptide repeat domain 396 502 IPR011990 GO:0005515
Aip07g01706 758 Gene3D Tetratricopeptide repeat domain 51 187 IPR011990 GO:0005515
Aip07g01706 758 Gene3D Tetratricopeptide repeat domain 188 288 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01706 Aip-Chr7 35197571 35208799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01706 73 714 Glycoside Hydrolase AT3G49170 31.563 6.31e-107 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01706 - - gmx:100781103 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01706 07 35197571 35208799 Aip07g01706 07 35197571 35208799 ECH