Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01250 ATGGGCGATCTTCATGTGAACGGCGTCGTTTTCGGGGAGGATCGCCCCTGCGCCTCGTCGCCGCCGTCGCCGCCGCTGCCGTTGTCAAACCCCGATCCGAGCTCCGTCGCTGCAGACGCATGGTCAGCCGCTGAGGCCACCACCTCCGCGATTCTCCGCCGGATTAGGCCGACGCTCGGTGCTGACCGGAAGCGCCGCGAGGTTGTTGATTACGTGCAGAGGCTGATTCGATATGGCGCTCGGTGTGAGGTCTTTCCATATGGGTCGGTTCCTTTAAAAACATATCTTCCAGATGGAGATATTGATTTGACTGCACTCAGTTGTCAAAATATTGAGGATGGCTTAGTGTCGGATGTTCACACTGTTCTACGAGGAGAGGAAATCAATGAAGCTGCTGAATATGAAGTGAAGGATGTTCGTTTCATTGATGCAGAGGTTAAGCTTATCAAATGCATTGTACAGAATATTGTTGTAGACATCTCTTTCAATCAATTAGGAGGACTCAGTACGTTATGTTTTCTTGAAAAGGTTGATCGACTTGTTGGCAAGGATCATCTCTTCAAACGTAGCATTATACTGATAAAAGCTTGGTGCTACTATGAGAGTCGTATTCTGGGTGCTCATCATGGCTTGATTTCAACATATGCTCTGGAAACACTTGTTCTGTATATTTTCCATCAGTTTCATGTATCCTTAGATGGTCCACTAGCGGTTCTCTATAGATTTTTGGACTACTTCAGCAAATTCGACTGGGATAATTATTGTGTTAGTTTGAAGGGACCAGTTGGAAAATCTTCTCTGCCTAATATAGTTGCTGAGGTGGCAGAAAATGGAGGAGACGCTCTGCTGACTGAGGAGTTCATCAAAACCTGTGTGGAATCATTCTCGGTACCTTCAAGGGGACCTGATTTAAATTTTCGTGCATTTCCTCAGAAACATCTTAACATCATTGATCCACTAAAGGAAAACAACAACCTTGGTCGCAGTGTCAATAAAGGTAATTTCTATCGAATACGCAGTGCTTTTAAGTATGGTGCCCGAAAGCTTGGCTGGATTCTTATGCTACCAGAAGATAGAATAGCAGATGAGCTTAATAGGTTCTTTGCGAACACATTGGATAGGCATGGATGCAATCATGGGAATGACATGCGAACTCCGAGTCTTGGTTGTAGTCCTAGAGATTTTGACTTCTCAGGAACATCAGAGGCTGCAGTGTGCTCTGAAGACAAGACATCTTTCTTTGTTTCTACCGGATCCAAAGTGGAAAGTTTACCCGGAAATCAACATAATTGTGAAACTAAAAATGAAAGAGAAAGGAATGGAGTAAAAGTTTTCTCCTCTTTGGCAGGGCCATCAGTTGACTCATCTGGGGATGAAAATGCAGATCCAATTTATAAACTAGTTGAAGATTCTAAGGATGTTGCAACAATAGGATGCTTGGATCTTGCAAGCAGTAATGATGCATCATATTTTTCAAATGGGATTGCTTCTAATGAAACAACAGTTAATTCTCTTATTGATGACGAGAAAGAGAAGCATGTTATGGAGAACAACTCTAGGTCAAATCTTGATGAAAATAGTGTGGCGTCTTATGGGCTAGTTGATTCGAGAAATGCAGTTGATGTCTTTGAAAATAATTTCCCTCATAGTGATAGTTACACTACTACTGTATCTTGGGGTACTGAAGCTACAAAATCCCTATTGGACCTGGCTGGGGATTATGAAAGTAACATTAGGAATCTACAATATGGTCAGATGTGCAATGGTTATACTGTCTCTCCTCTTGTGGTGCCTAGTCCTCCTAGGTCTCCAAAGTTACAGAATAGGAATCCTTGGGAAACTGTTAGGCAATGTCTTCAGATTAATCAAAGCATTCATTCACAGGCAAATTCAAATGGTGTTCTTGGACCAGTTTACCTTGTTAATCATGCTACTCTACCGATCCCCCCTTTTGGTTCAGAAGAGAAGAGAAAACTTCGAGGAACAGGCGCATACTTCCCTAATATGTCATCTCGTCCATATAGGGATAACAGGCCAATGTCAGGAAGGGGACGGAGCCAAGCATCTGGTGCTCATGGGCAACAACATAGACATGCACATAGTCGTAACAACGGCTTCATTCCTACTCTACAAGAGTTGAATTTGTCTGTGGAGGGAAGTTTTGAACATCCTCTTGAAGTATATCCTCCTCTTGGCAGTGCTAAGTCCAGATCATCAGAAACGTATTTCAGCCAACCTGCCATATGGGGACCACGTCATTCTAACGGTTTCCCTCACACGTCTGAAAAGCATGAGTCTGGTACTGTAAGCCCTCAGCATCGTGGACCACCAAGAATTGAAGTTAGCAATCTACATGAATCAAGCATTTCTACTACTAAGGGCTCTGCTCCCAGCACAGGGGTCGTGTCAGAGGAGAGTTCTGACTCATTATCTGCAGTTGATAACAAAAGTTTGTGCTCCTAG 2463 0.4356 MGDLHVNGVVFGEDRPCASSPPSPPLPLSNPDPSSVAADAWSAAEATTSAILRRIRPTLGADRKRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSCQNIEDGLVSDVHTVLRGEEINEAAEYEVKDVRFIDAEVKLIKCIVQNIVVDISFNQLGGLSTLCFLEKVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHQFHVSLDGPLAVLYRFLDYFSKFDWDNYCVSLKGPVGKSSLPNIVAEVAENGGDALLTEEFIKTCVESFSVPSRGPDLNFRAFPQKHLNIIDPLKENNNLGRSVNKGNFYRIRSAFKYGARKLGWILMLPEDRIADELNRFFANTLDRHGCNHGNDMRTPSLGCSPRDFDFSGTSEAAVCSEDKTSFFVSTGSKVESLPGNQHNCETKNERERNGVKVFSSLAGPSVDSSGDENADPIYKLVEDSKDVATIGCLDLASSNDASYFSNGIASNETTVNSLIDDEKEKHVMENNSRSNLDENSVASYGLVDSRNAVDVFENNFPHSDSYTTTVSWGTEATKSLLDLAGDYESNIRNLQYGQMCNGYTVSPLVVPSPPRSPKLQNRNPWETVRQCLQINQSIHSQANSNGVLGPVYLVNHATLPIPPFGSEEKRKLRGTGAYFPNMSSRPYRDNRPMSGRGRSQASGAHGQQHRHAHSRNNGFIPTLQELNLSVEGSFEHPLEVYPPLGSAKSRSSETYFSQPAIWGPRHSNGFPHTSEKHESGTVSPQHRGPPRIEVSNLHESSISTTKGSAPSTGVVSEESSDSLSAVDNKSLCS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01250 820 MobiDBLite consensus disorder prediction 746 820 - -
Aip07g01250 820 SUPERFAMILY PAP/OAS1 substrate-binding domain 186 352 - -
Aip07g01250 820 SUPERFAMILY Nucleotidyltransferase 38 205 IPR043519 -
Aip07g01250 820 MobiDBLite consensus disorder prediction 682 704 - -
Aip07g01250 820 MobiDBLite consensus disorder prediction 662 704 - -
Aip07g01250 820 CDD NT_PAP_TUTase 64 168 - -
Aip07g01250 820 Coils Coil 815 820 - -
Aip07g01250 820 Gene3D Beta Polymerase, domain 2 57 163 IPR043519 -
Aip07g01250 820 Gene3D - 164 362 - -
Aip07g01250 820 MobiDBLite consensus disorder prediction 783 820 - -
Aip07g01250 820 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 19 796 - -
Aip07g01250 820 MobiDBLite consensus disorder prediction 13 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01250 Aip-Chr7 19655526 19662725 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01250 - - ahf:112702680 1600.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01250 07 19655526 19662725 Aip07g01250 07 19655526 19662725 ECH
Aip07g01250 07 19655526 19662725 Aip10g02202 10 98469633 98474875 ECH