Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01228 ATGAATCTTTCAAAGTGTGAAGTTGTTCTGTTCTTGTGGTTTTGCTGCTATTTGCTATTGGCTACTGCTCAGAATGGAGTCACTCACCCCAATGAAGTTAAGGCGTTGAGAGCCATAAAGAACAATTTGATTGATGTCAATAGAAATTTGAGTAATTGGAATCAAGGAGATCCATGTATTAATAGATGGACAGGGGTTTTGTGTCACGACAGAAGATTTAACGATGGATATTTTCATGTTCGGGAACTGCAACTATATAGAATGAACTTGTCTGGAAAATTGGCACCGGAGATTGGCAACTTCACTTATCTGGAAATATTGGATTTTATGTGGAACAAGATAAGTGGGACCATACCAAAAGAAATTGGCAACATCATTACCCTGAAACTCTTGCTCCTGAATGGAAATAAATTAATTGGTCCACTGCCAGAAGAGCTTGGCTATTTACCAAACTTGACCCGAATGCAAATTGATCAGAACAATATCAATGGATCTATACCTTCATCATTTGCAAACCTCAATGCCTGCAAGCACTTTCACATGAACAATAATTCACTTAGCGGCCATATCCCGCCGGAGCTTTCCCAACTACCAAACCTTTTTCACCTGCTTCTTGACACAAACAACTTAACAGGAACACTTCCCCCTGATCTCTCTAAGATGCCACGCTTAAAGATTCTGCAGCTTGATAACAATAACTTTAGTGGAAGTACTATTCCCGAGTCTTATGGAGATATGTCACATTTGTTCAAACTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTTATTATATTGATCTCAGTCACAATCAGCTGAATGAAACAATTCCTACAAATCAGCTTTCTGGGAATATCACAACCATTGTGTTATCAAACAACAATCTCAGTGGAACTATTCCATTAAATTTTTCAAATCTTCCACGTCTTAAGAAATTGTCAATTGCAAACAATAAATTGCGTGGCAACGTTCCCTCCTCCATTTGGCAGAACAAGACTTCAAGTGCAAATGAAAGCCTTATTGTGGACTTGCAAAACAATGAGCTCAACACCATATCAGGAAGTACTACTCTTCCTCCAAATGTCACACTCCAGTATGTTTTTCCTGCAACTGTTAACAACACCACAACTAATCAGAAGTTCAATGATAGCGAGTATTCGCGGATTAGAAGCACGTTGACAGGGTGGAATATTAGTGACAGTGACTTGTTTGGGCCTTATGAACTTATGGATCTTCCTCCTTATAGTCAGGTGATTGTGGTGTCTTCAGGTTCAGGGCTAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTTCAATTGCGGTAGCAGTTACATTATCTGCAATTGTTTCCCTTCTTATATTGAGAATCAGATTGAGAGATTATCGTATACTTTCCAAACGGCAACATGGAACAAGGATCTCAATAAAAATTGAAGGTGTGAGGGTATTTGTTTTTGAAGAGTTGGCAGCAGCAACTAATAATTTCAGTGAGTCTTCTCAAGTTGGACGCGGCGGGTATGGGAAGGTTTATAAAGGCATTCTTGCTGACGGCACTGCTGTCGCCATAAAACGTGCACAGGAAGGATCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATACAGTTGCTGTCACGGCTGCATCACCGAAACCTTGTGTCTCTAATTGGATATTGTGATGAAGAGGGTGAACAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCCTTATTCAAGAACACCTCTGAGTTTTACAATGAGAATGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAGGCCAGTAATATACTATTGGACTCTAAGTTCAATGCAAAGGTTGCTGATTTTGGACTTTCGCGACTCGCCCCGGTGCCAGATGTCGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAAGGGACCCCGGGTTACCTTGATCCGGAGTATTTCTTAACTCGCAAGTTAACAGACAAGAGTGATGTTTATAGTCTTGGTGTCGTGTTTCTGGAAATTGCAACCGGAAGGGCACCATCAGTCACTATCAAAATAATCTATATAACTTATCATGTTACTTTGGATTACCAATCCGGCGGTCTAGTTGCAGTTATCGATGAACGCATGGGGCCTTGTCCTTCAGAATGTGTGCAACCATTTTTGACATTGGCTCTAAAGTGTTGCGAAGATGCGCCAGACGAAAGGCCTAAGATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGGTCCATGATTCCTGAGTCTAATGGCAAAGTAGCTGAATATGTTAGCAGTGATTCAGGAACATTATTCAGTTCACAACCTTCATCATCCACCGCTTTTGCATCCGTAGAAATTTCTGGCAGTGATCTTATTAGTGGAGATATTCCAACCATCAAGCCAAGATAA 2502 0.4105 MNLSKCEVVLFLWFCCYLLLATAQNGVTHPNEVKALRAIKNNLIDVNRNLSNWNQGDPCINRWTGVLCHDRRFNDGYFHVRELQLYRMNLSGKLAPEIGNFTYLEILDFMWNKISGTIPKEIGNIITLKLLLLNGNKLIGPLPEELGYLPNLTRMQIDQNNINGSIPSSFANLNACKHFHMNNNSLSGHIPPELSQLPNLFHLLLDTNNLTGTLPPDLSKMPRLKILQLDNNNFSGSTIPESYGDMSHLFKLSLRNCNLKGPIPDLSRIPNLYYIDLSHNQLNETIPTNQLSGNITTIVLSNNNLSGTIPLNFSNLPRLKKLSIANNKLRGNVPSSIWQNKTSSANESLIVDLQNNELNTISGSTTLPPNVTLQYVFPATVNNTTTNQKFNDSEYSRIRSTLTGWNISDSDLFGPYELMDLPPYSQVIVVSSGSGLSKGALAGIILGSIAVAVTLSAIVSLLILRIRLRDYRILSKRQHGTRISIKIEGVRVFVFEELAAATNNFSESSQVGRGGYGKVYKGILADGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSPYSRTPLSFTMRMKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFNAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIATGRAPSVTIKIIYITYHVTLDYQSGGLVAVIDERMGPCPSECVQPFLTLALKCCEDAPDERPKMAEVVRELENIWSMIPESNGKVAEYVSSDSGTLFSSQPSSSTAFASVEISGSDLISGDIPTIKPR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01228 833 Gene3D Phosphorylase Kinase; domain 1 475 580 - -
Aip07g01228 833 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Aip07g01228 833 SMART LRR_typ_2 221 246 IPR003591 -
Aip07g01228 833 SMART LRR_typ_2 316 340 IPR003591 -
Aip07g01228 833 SMART LRR_typ_2 197 220 IPR003591 -
Aip07g01228 833 SMART LRR_typ_2 269 293 IPR003591 -
Aip07g01228 833 SMART LRR_typ_2 149 172 IPR003591 -
Aip07g01228 833 ProSiteProfiles Protein kinase domain profile. 505 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01228 833 SMART serkin_6 505 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01228 833 Gene3D Ribonuclease Inhibitor 27 293 IPR032675 -
Aip07g01228 833 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Aip07g01228 833 Gene3D Ribonuclease Inhibitor 294 375 IPR032675 -
Aip07g01228 833 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 376 810 - -
Aip07g01228 833 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 374 - -
Aip07g01228 833 Pfam Protein tyrosine and serine/threonine kinase 508 776 IPR001245 GO:0004672|GO:0006468
Aip07g01228 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Aip07g01228 833 SUPERFAMILY Protein kinase-like (PK-like) 490 802 IPR011009 -
Aip07g01228 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 376 810 - -
Aip07g01228 833 SUPERFAMILY L domain-like 44 376 - -
Aip07g01228 833 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Aip07g01228 833 Gene3D Transferase(Phosphotransferase) domain 1 581 794 - -
Aip07g01228 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 374 - -
Aip07g01228 833 CDD STKc_IRAK 511 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01228 Aip-Chr7 18833928 18842914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01228 90 833 Receptor kinase-like Gene Family AT5G37450 40.209 7.06e-152 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip07g01228 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01228 - - gmx:100777308 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01228 07 18833928 18842914 Aip07g01228 07 18833928 18842914 ECH