Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01213 ATGTGGAGTAGAGGGTGGTGTGTAGGGTCATTGTTGAGGCAAAGGGTATGTGCTACTTTAAATATTGGAAGTAGCCATGGCTATGGTGGAAAGGCTCATCAACCTTTTGATCACACTCCATTGTTCGGTTTGAAAGGTTTTGCTGATGATGGAAGAAAGAGGAATAATAATGGAGAAGGAGGAAGAGGTGTTGGTGTTGGTTCTATATCTGTTTTTCTGAACCGAATGAATAATAAGAGGGGTGTGTGTTCATCAACTTGGGTTTCATCTCCTTTTAACAATGGGGGCATTAATAATTCAAATTCTCCATCTTCTTCTTATGGGAAAATAGAAGGGACAAATAGTTTATCATACGCTGAGGCGAAGAAGTTAATGAGGCTAGTGAATGTGGAGAATCTAAAGCTGAAGCTTGGAAGTGATGGGAAGGAAGTTATTCCGTACAATGAACTTATTGAAGCATGTGAAAGCATGGGAGTTGTAAGGAATAAAGAAGAGGCTATGGCGTTTGCTAAGGTTCTTGATGAAGCTGGTGTTATTCTTCTCTTTAGGAACAAGGTCTATCTGCACCCTGATAAGGTGGTTGATCTGGTTATAAGTGCAGTTCCACTAGCATTAACTTCTGAGAATGATCCTAGAAGGGAAGAACTAAAGAGGCTTCAAGAGAAGAAAGAAGAGCTCGATGTCTTGGCGCACAAGCAAGTCCGGCGCATCCTCTGGGGCGGCCTAGGATTCGGCATAGCCACCGTCTCCCTCTTCTTCCGGCTAACATTCTGGGAATTCTCATGGGACGTCATGGAGCCGATCGCATTCTTCACCACGTCGACCGGCCTAATCATCGGCTATGCCTACTTCCTATTCACCTCAAGGGACCCTACTTACCAAGACTTCATGAAGAGGCTATTCCTTTCAAGGCAGAGGAAGCTTCATAAGAGGCACAATTTTGATATTGACAAGTATAATGATCTTAGGTGCAAATGCAAAACACCTTTAGATGCAAAAACCACACTCAAGAATCGTTTAGGCGTGGATCTAGATCTGGAGGAGGCTTAA 1050 0.4333 MWSRGWCVGSLLRQRVCATLNIGSSHGYGGKAHQPFDHTPLFGLKGFADDGRKRNNNGEGGRGVGVGSISVFLNRMNNKRGVCSSTWVSSPFNNGGINNSNSPSSSYGKIEGTNSLSYAEAKKLMRLVNVENLKLKLGSDGKEVIPYNELIEACESMGVVRNKEEAMAFAKVLDEAGVILLFRNKVYLHPDKVVDLVISAVPLALTSENDPRREELKRLQEKKEELDVLAHKQVRRILWGGLGFGIATVSLFFRLTFWEFSWDVMEPIAFFTTSTGLIIGYAYFLFTSRDPTYQDFMKRLFLSRQRKLHKRHNFDIDKYNDLRCKCKTPLDAKTTLKNRLGVDLDLEEA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01213 349 Pfam Mitochondrial calcium uniporter 164 322 IPR006769 -
Aip07g01213 349 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 109 328 IPR039055 GO:0051560
Aip07g01213 349 Coils Coil 212 236 - -
Aip07g01213 349 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 109 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01213 Aip-Chr7 18169564 18172538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01213 K20858 - gmx:100788407 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01213 07 18169564 18172538 Aip07g01213 07 18169564 18172538 ECH
Aip01g00214 01 2082677 2085190 Aip07g01213 07 18169564 18172538 PCT