Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01206 ATGGTGTGGGGACTCTTCCCCAATGATCCTCTTTCTGGTGAAGATAAGTACTACATTTTCAAAACTGGAACTTATAAAGTTGGTCGAAAAGGTTGTGATGTAATCATCACTAAAGATAAAGGGGTTTCTCGGGTTCATGCAGAAATAATTGTTAATGGGATGAACCTGTTAAACTCTTTACCAAATGAACGTTCTCGTATGTCACCAAATGTACAGATCAAAGATTGCTCCAAATATGGGACATTTATTAGCAAGAATAATGGACACAGGATGAAAGTTCATGAGCTTCCAAACAAAGAAATAGCTTTGGACAATGGCGATCTTGTCTCATTTGGTACTGGTAGTGCTACCTACAAGTTTTGCCATGTCCCACTTATGTTTTTCATTTGTTCCTTGGACAAAGTAGATCAATCTATTGAAGAGAAAATTTCGTCAATTGGTGCTGCTAGTACTTGTACCTTAAGTGAAGATTGCACACACGTTCTGGTGGATCAACTCATGCCATTGAAAAAGGATATTGTTGATGCTGTTGTAGCAAAAAAACATTGTGTTCTCAAAACATGGCTTGAGGATTTTGCAGAAAAGAATATTGTCACTGATATGCCTAGCTGTTATTCATATATACCAACGGTGTCAGTGGAAGGAATATCTATCAAAGTTGCTGACCCTAAAACTCGTGAAAATTGCTTGAAAGGATACACGTTTTTGTTAGAATCTGTGCATATGTACAAATTCAGGGATCAGCTCAAATCTTTGTTGGATGTCACTGGTGCAAAAACTGTCTCCTATGAATATTTTTGTTCAAATAGTCAGGGTTCAGATTATGGAGACGATAATCGTTTGGTTTGTGTCATCCCAGGGGTACCAGCATGCAAATCTGATCGCTTCAATAAATTAAGTTCTTTGCTTAGAGTGAATGAGATGGATGTAATATTTGCTGCTTTAAGTGGACATCTTGATCCATCGATACTGAAGTCACCATGCATACTTGTTTCATCTTCATGCTCCACAGACGAGACAGTGGTAGCAGATTCAGATACTGAAGTTGAAACAGCCACATCAGCCCATGCAACTGAGACATTCCTCAACGGAAATACCATACAATATGTTAAAACTGAAGCATTGGATGATGATTCTGGCAGTATGGATAATAAAAAACATGAGAAAATGGAACCATCCGCAGTTGATGTTTCTACCAGATCAACTGACATAAAACAAGCAAAAACAGCGTCACCCTTGGATGATTGTTCTGCCAAATTGGAAACTCATGCTATGAGCTTCAGAGATGGTAGTGGTAGTATAAAAGTGAAGAAAGACAAGGTTGATGATTATGGAAGTGGAACTGCAGATATTATTTATAGTCAAGATTTAGTTGTCCGAGATGTAAACAGAGTAACTAACATGAGTACTGCACAAAACAGCAGCGTTCCAAATTTTAAACATTTTAGAAAGACACATACTCAATCTGGTAATAGTTTCGAAAGTCTTGTTCCGTTTGCAAAATATCCATACAAGGACTCTGATTTTGGGAATGATGAGGTACATGAGTCTGTGAAAGAGGAAAAACGGCGGAAGAAAATGGAAGCTGTGGCTGAAGACCTTTTTAATAATGAGAAGGCAAGAAAGCGAGGCACAGCTGGTTCACTTCGTGGGATCCTTATTTCGTGA 1668 0.3825 MVWGLFPNDPLSGEDKYYIFKTGTYKVGRKGCDVIITKDKGVSRVHAEIIVNGMNLLNSLPNERSRMSPNVQIKDCSKYGTFISKNNGHRMKVHELPNKEIALDNGDLVSFGTGSATYKFCHVPLMFFICSLDKVDQSIEEKISSIGAASTCTLSEDCTHVLVDQLMPLKKDIVDAVVAKKHCVLKTWLEDFAEKNIVTDMPSCYSYIPTVSVEGISIKVADPKTRENCLKGYTFLLESVHMYKFRDQLKSLLDVTGAKTVSYEYFCSNSQGSDYGDDNRLVCVIPGVPACKSDRFNKLSSLLRVNEMDVIFAALSGHLDPSILKSPCILVSSSCSTDETVVADSDTEVETATSAHATETFLNGNTIQYVKTEALDDDSGSMDNKKHEKMEPSAVDVSTRSTDIKQAKTASPLDDCSAKLETHAMSFRDGSGSIKVKKDKVDDYGSGTADIIYSQDLVVRDVNRVTNMSTAQNSSVPNFKHFRKTHTQSGNSFESLVPFAKYPYKDSDFGNDEVHESVKEEKRRKKMEAVAEDLFNNEKARKRGTAGSLRGILIS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01206 555 Pfam FHA domain 25 112 IPR000253 GO:0005515
Aip07g01206 555 PANTHER NIBRIN-RELATED 2 539 IPR040227 GO:0006302|GO:0007095|GO:0030870
Aip07g01206 555 SMART FHA_2 24 91 IPR000253 GO:0005515
Aip07g01206 555 CDD BRCT 127 191 - -
Aip07g01206 555 Gene3D - 7 120 - -
Aip07g01206 555 Gene3D BRCT domain 121 203 IPR036420 -
Aip07g01206 555 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Aip07g01206 555 CDD FHA 2 120 IPR000253 GO:0005515
Aip07g01206 555 SUPERFAMILY SMAD/FHA domain 16 122 IPR008984 GO:0005515
Aip07g01206 555 SUPERFAMILY BRCT domain 125 200 IPR036420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01206 K10867 - gmx:100783205 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01206 07 18016899 18022569 Aip07g01206 07 18016899 18022569 ECH