Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01138 ATGGGATTTGAGAAGATCAAGGTCGACAACCCCATCGTCGAGATGGACGGTGATGAAATGACCAGAGTTATCTGGAAGTCAATCAAGGATAAGCTCATTTTGCCCTTCATGGAGTTGGACATCAAGTATTTTGACCTTGGTCTTCCCTACCGTGATCAGACTGATGATAAAGTTACAGTTGAGAGTGCAGAAGCAACTCTTAAGTATAATGTAGCAATCAAGTGTGCAACCATCACGCCAGATGAGGCTCGAGTGAAGGAATTTGACCTCAAGCAAATGTGGAAGAGTCCAAATGGGACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCCATTCTTTGCAAAAACGTCCCTCGCCTTGTTCCTGGCTGGACAAAGCCAATATGCATTGGAAGACACGCATTTGGTGATCAATATAGGGCCACTGACACAGTTATTAAAGGAGCTGGGAAATTAAAGCTGGTGTTCGTTCCAGAAAGTGGTGAAAAGACTGAACTAGAGGTTTTTAACTTCACCGGTGAAGGAGGTGTTTCAATGGCTATGTACAACACTGATGAGTCTATCCGTGCTTTTGCTGAGTCTTCTATGGCAACTGCTCTTGAGAAAAAATGGCCTCTTTATCTTAGCACCAAAAACACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATATTCCAAGAAGTGTATGAGAAAAACTGGAAATCAAAGTATGAGGCTGCTGGTATATGGTATGAGCATCGGCTCATTGATGATATGGTGGCGTATGCACTCAAGAGTGAAGGAGGTTACGTATGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATTTCTTAGCTCAAGGTTTTGGATCATTGGGTTTGATGACATCTGTATTGGTTTGCCCTGATGGGAAGACTATTGAAGCAGAAGCAGCTCACGGCACAGTAACGCGTCACTATAGGGTTCATCAGAAAGGAGGGGAAACCAGCACAAACAGCATAGCATCCATCTTTGCTTGGACTAGAGGGCTTGCCCACAGGGCAAAATTGGATAACAATGCCAGACTTTTGGATTTCACTCAAAAACTAGAAGCAGCTTGCATTGGAGTAGTGGAGGCTGGGAAGATGACCAAGGATTTGGCACTCATTATTCATGGACCCAAGCTTTCAAGGGAGAATTACCTGAACACCGAGGAGTTCATCGATGCAGTGGCAGCGGAACTAAAAGCACAGCTTTCTGCTTAG 1236 0.4377 MGFEKIKVDNPIVEMDGDEMTRVIWKSIKDKLILPFMELDIKYFDLGLPYRDQTDDKVTVESAEATLKYNVAIKCATITPDEARVKEFDLKQMWKSPNGTIRNILNGTVFREPILCKNVPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPESGEKTELEVFNFTGEGGVSMAMYNTDESIRAFAESSMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEKNWKSKYEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDNNARLLDFTQKLEAACIGVVEAGKMTKDLALIIHGPKLSRENYLNTEEFIDAVAAELKAQLSA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01138 411 Gene3D Isopropylmalate Dehydrogenase 4 411 - -
Aip07g01138 411 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 2 411 IPR004790 GO:0004450|GO:0006102
Aip07g01138 411 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 409 - -
Aip07g01138 411 Pfam Isocitrate/isopropylmalate dehydrogenase 7 401 IPR024084 -
Aip07g01138 411 TIGRFAM nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 5 410 IPR004790 GO:0004450|GO:0006102
Aip07g01138 411 PIRSF IDH_NADP 1 411 IPR004790 GO:0004450|GO:0006102
Aip07g01138 411 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 2 411 - -
Aip07g01138 411 SMART Iso_dh_2 11 401 IPR024084 -
Aip07g01138 411 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 272 291 IPR019818 GO:0000287|GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01138 Aip-Chr7 16190067 16194622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01138 K00031 - gmx:100791166 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01138 07 16190067 16194622 Aip07g01138 07 16190067 16194622 ECH