Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01123 ATGGGGGAACTCATTCTCAGAGTTCCAAAATCTGCTTTGATGACAACTCATAGTGTTATGCAACATACAAATCTCTCTCAAGCTCTTAATAGGCACCCTTCTCTTTCTTCAACCCAGATACTGAATGTTTGCCTGTTGTATGAAGTTGGAAAAGGAAAGGCTTCGAGGTGGTATCCTTACCTCATGCATTTACCAAAGAGTTATGACATCCTAGCCATGTTTGGTGAATTCGAGAAAACTGCTCTGCAAGTGGATGAGGCTATATGGGTAACTGAAAAAGCCGTGCTAAAAACCAAATCAGATTGGCAGCAAGCTCATGCTTTGATGGAAGATCTCAAATTTAAGCCCCGGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGATATCTTCCCGGACATTGCATATACCGTGGGATTCAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAAGGAGCCATCTGACATTGGGGATCTAGAGGATTTGCTATCTAGCTCTTCAATCCATGATGGTTCCTTATCAAATGAAGACAATACTACAGTCGCAGATGCAGAGCAGCTTGATTCCCAGTCTCAGAGATTAACAGATGGGGGGTTTGAAGAAGATGCTAATGCATATTGCTTTTATGCTAGGGCAAATTACAATAAAGGAGATCAGGTTCTGCTATGTTATGGAACTTACACAAATTTAGAGCTTCTTGAACACTATGGTTTTATCCTACAAGAAAATCCAAATGATAAAGTGTTTATTCCTCTGGAACCTGCTGTGTATTCTTCCACTTCTTGGTCCAGGGAATCATTGTACATCCATTACAATGGGAAGCCTTCCTTTGCGCTACTAGCTGCATTGCGGCTGTGGGCGACTCCTCAAATCAAGAGGAGGTCTGTTGCACATCTTGTTTATTCCGGATCTAAAATCTCCGCAGACAATGAAAATTTCATCATGAAATGGCTATTGAAGACTTGCCATGGCGTCTTAAAGAATTTGCCAACATCTATTGAAGATGACACCTTGCTCCTGAATGCAATGGATAATAGTCAAGATTTTTGTACTTTTTTGGAGGTTACAAAACTCATGTCTTTACGGGATGAAGTTGATACCTTCTTAGAAGCTCATAATATGAAGGATAAATGTAGTGATAGCAGTATAGTTTTATCTAGAAAAACAAGGTGGTCTATGGATAAGTGGAAGTTGAGTATTCAATGGAGAATCAATTATAAGAAAGTCCTCCTTGATTGTATCTCTTATTGTAGTCAAATATTAGATTCTCTCGTGGAATAA 1308 0.4006 MGELILRVPKSALMTTHSVMQHTNLSQALNRHPSLSSTQILNVCLLYEVGKGKASRWYPYLMHLPKSYDILAMFGEFEKTALQVDEAIWVTEKAVLKTKSDWQQAHALMEDLKFKPRLLTFKAWVWASATISSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDIGDLEDLLSSSSIHDGSLSNEDNTTVADAEQLDSQSQRLTDGGFEEDANAYCFYARANYNKGDQVLLCYGTYTNLELLEHYGFILQENPNDKVFIPLEPAVYSSTSWSRESLYIHYNGKPSFALLAALRLWATPQIKRRSVAHLVYSGSKISADNENFIMKWLLKTCHGVLKNLPTSIEDDTLLLNAMDNSQDFCTFLEVTKLMSLRDEVDTFLEAHNMKDKCSDSSIVLSRKTRWSMDKWKLSIQWRINYKKVLLDCISYCSQILDSLVE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01123 435 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 420 - -
Aip07g01123 435 Gene3D - 262 435 IPR036464 -
Aip07g01123 435 SUPERFAMILY SET domain 2 252 IPR046341 -
Aip07g01123 435 CDD SET_LSMT 2 248 - -
Aip07g01123 435 Gene3D set domain protein methyltransferase, domain 1 1 248 - -
Aip07g01123 435 Pfam Rubisco LSMT substrate-binding 283 356 IPR015353 -
Aip07g01123 435 PANTHER PROTEIN SET DOMAIN GROUP 40 2 420 - -
Aip07g01123 435 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 244 356 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01123 Aip-Chr7 15886987 15889867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01123 - - ahf:112764617 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01123 07 15886987 15889867 Aip07g01123 07 15886987 15889867 ECH