Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00911 ATGTTCAAAGAATTCAAAGCAAAGTTAGAACTTGAATCTAGAAAGAAGATCAAGTGTTTAAGGACAAATAATGGAGGAGAATATGTCGATGGTGATTTTCTAACATTTTGCAAGCAAGCAGGTATTCAACAGCAATTCACAGTTGCATATACGCCTCAGCAAAATGGTGTAGCAGAGCGAATGAATAGGACTCTCCTAGAAAGAGCACGAGCTATGTTGCAAACTGCAGGCTTGGCCAAGTCTTTTTGGGCAGAAGTTGTTAAAACCGCCTGTTATGTGATAAATCGGTCACTATCAACTGCAATTGGGTTAAAGACACCAACGGAGATGTGGCAAGACGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGAGCAACAAGAAGAGGATGGAGGCGATGATAAGTACGAGGCTGTCGGACGTGGTGTTGGACATAGTGATGCCGTACATCCACGACCCGAAGGACCGCGACGCCGTGTCGCAGGTGTGCCGGCGGTGGTACGAGCTGGACTCACTGACTCGGAAGCACGTGACCATCGCGCTCTGCTACACCACGTCACCGGACAGGCTCCGCCGCCGCTTCCCCCACTTGGAGTCCCTGAAGCTCAAAGGAAAGCCACGCGCCGCCATGTTCAACCTCATACCTGAGGATTGGGGCGGTTTCGTTACTCCTTGGGTTAAAGAGATCTCTCACTACTTCGATTGCCTTAAGAGCCTTCACTTTCGACGAATGATCGTTAGGGATATGGATCTTGAGCTTCTTGCTCGTTCCAGAGGCCATGTTCTTCAAGCTCTTAAGCTTGATAAGTGTTCTGGCTTCTCCACTGATGGACTCTACTATATTGCCAGATTTTGCAGGAATTTGAGAATCTTGTTTTTGGAGGAAAGCGCAGTAGTTGAGAACGATGGTGAATGGCTCCATCAGCTTGCTCTAAACAACACAGTTCTTGAGTCCCTCAATTATTACTTGACGGATATTAACAACCATGTTAGGATTCAGGACCTTGAGCTCATAGCCAGAAACTGCCCCAACTTAGCCTCTGTGAAGATCACTGATTCTGAAATCATGGATCTTGTCAACTTCTTCAGATATGCATCGTCACTCGAAGAATTCTCAGGGGGCACCTACAATGAGCCACCGGAGAGGTACAATGCCGTGGTGTTGCCAGCAAGGTTAAGCCGATTGGGTTTGACATACATTGGAAGTGATGAATTGCCGATTGTGTTCCCTTACGCCACACGACTCAAGAAATTGGACCTTCTATATGCATTGCTGGACACAGAGGATCACTGTAATTTAATTCAAAGGTGCCCCAACTTGGAAGTCTTAGAGTCAAGGAATGTAATTGGGGACAGAGGATTAGAAGTACTTGCCAGCAGTTGCAAGAAGCTAAAAAGGCTAAGAATCGAAAGAGGTGACGATGATCAAGGAATGGCTGAAGAAGCAGGCGTAGTTTCCCAGAGAGGACTAACTGCTTTGTCACAAGGCTGCCCCGAACTTGAATACATGGCTGTTTATGTATCTGACATCACAAACGCGTGTTTGGAACACATAGGCACCCACCTCAGAAACCTCTGCGATTTTCGCCTCGTCTTGCTCGACCGAGAGGAGAAGATCACTGATTTGCCCCTTGACAATGGGGTGAGGGCATTGCTAAGAGGTTGCAACAGACTGAGAAGATTCGCATTGTACCTTAGACCAGGTGGCCTCACTGACGTGGGGCTCGGTTACATAGGGCAATATAGCCCGAATGTTAGATGGATGTTACTCGGCTACGTTGGTGAAACCGATAGAGGACTCTTGGAGTTCTCAAAGGGTTGTCCAAGCCTTCAGAAGCTTGAGATGAGAGGGTGTTCATTTTTCAGTGAGTATGCATTGGCTATTGCAGCGACACGGTTGACTTCTCTGAGGTACCTTTGGGTGCAAGGCTATGGAGCGTCTCGTTCGGGGCGTGATCTTCTGGCAATGGCTAGACCATTTTGGAACATCGAGTTGATCCCTTCGAGGCGTGTGGCCATGAATGACAATGCTGAGGTCGAGCATCCAGCTCACATTCTTGCATACTACTCCCTTGCTGGACCGAGAAAAGATTTTCCAGATACTGTTATACCTTTGGATCCAGCA 2121 0.4828 MFKEFKAKLELESRKKIKCLRTNNGGEYVDGDFLTFCKQAGIQQQFTVAYTPQQNGVAERMNRTLLERARAMLQTAGLAKSFWAEVVKTACYVINRSLSTAIGLKTPTEMWQDGGGGGGGGGGSNKKRMEAMISTRLSDVVLDIVMPYIHDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTSPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVKEISHYFDCLKSLHFRRMIVRDMDLELLARSRGHVLQALKLDKCSGFSTDGLYYIARFCRNLRILFLEESAVVENDGEWLHQLALNNTVLESLNYYLTDINNHVRIQDLELIARNCPNLASVKITDSEIMDLVNFFRYASSLEEFSGGTYNEPPERYNAVVLPARLSRLGLTYIGSDELPIVFPYATRLKKLDLLYALLDTEDHCNLIQRCPNLEVLESRNVIGDRGLEVLASSCKKLKRLRIERGDDDQGMAEEAGVVSQRGLTALSQGCPELEYMAVYVSDITNACLEHIGTHLRNLCDFRLVLLDREEKITDLPLDNGVRALLRGCNRLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDRGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAATRLTSLRYLWVQGYGASRSGRDLLAMARPFWNIELIPSRRVAMNDNAEVEHPAHILAYYSLAGPRKDFPDTVIPLDPA 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00911 707 Gene3D Ribonuclease Inhibitor 174 707 IPR032675 -
Aip07g00911 707 SUPERFAMILY RNI-like 212 643 - -
Aip07g00911 707 SUPERFAMILY F-box domain 125 173 IPR036047 GO:0005515
Aip07g00911 707 Gene3D - 3 114 IPR036397 GO:0003676
Aip07g00911 707 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 133 705 - -
Aip07g00911 707 SUPERFAMILY Ribonuclease H-like 6 112 IPR012337 -
Aip07g00911 707 Gene3D - 123 173 - -
Aip07g00911 707 Pfam Transport inhibitor response 1 protein domain 194 240 IPR041101 -
Aip07g00911 707 SMART LRR_CC_2 258 283 IPR006553 -
Aip07g00911 707 SMART LRR_CC_2 460 483 IPR006553 -
Aip07g00911 707 SMART LRR_CC_2 554 580 IPR006553 -
Aip07g00911 707 SMART LRR_CC_2 436 459 IPR006553 -
Aip07g00911 707 SMART LRR_CC_2 606 631 IPR006553 -
Aip07g00911 707 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 133 705 - -
Aip07g00911 707 ProSiteProfiles Integrase catalytic domain profile. 1 115 IPR001584 GO:0015074
Aip07g00911 707 Pfam F-box 135 175 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00911 Aip-Chr7 10913489 10927160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00911 K13463 - gmx:100793081 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00911 07 10913489 10927160 Aip07g00911 07 10913489 10927160 ECH
Aip10g01671 10 38384021 38388000 Aip07g00911 07 10913489 10927160 PCT