Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00897 ATGGTTGATTTAGAGTGGAAATCAAAGATGGCAAGGTCCAAAATCAACGTGCATGATCCCAAGTCTCCAAAACTCGCCGTTTCAGACAAACCCGTCCTTCAGCCAAACCTACCCGCTTTGCAACTACCTCTTACACCAAACGACATCAAAACAGCGTCGTTTCCCCTTTGTGAAGCTTACGACAACTATCTCCGCCTCCCTCAGCTCCGAACACTATGGGACTCAAACAACTTCCCCAGATGGGCCCATGAGCCCATCATGAAGCCCGCCCTCAACGGTCTCGAGATCACGTTCCGCTTCATCTCAACCGTTTTGTCGGACCCAAGGCCGTACGCGAACAAACGCGAGTGGGCCCGCAGGCTCGAGTCTTTGGCCAAGGCCCAGGTACAGCTCATCTCCACGCTCTGCAAAGACCAGGAAGAAAGCCCGGAGACATGTGGTGAAGTTCCGGTAAGGGACGTCAGCAGTAGCGGTTACAGAAGCTATAGCGAGGCTAGTTTGCTTCCAAGGCTCGCCACGTGGCACAGATCCAAAGATGTAGCTCAGAGGATCCTCGCCACCGTGGAAGCTGAGATGACGAGATGTTCGTACACTCTAGGCTTGGGCGAACCGAACCTCACCGGAAAACCGATCCTCCGTTACGACGCGGTTTGCATGCCAAACGAGCTTCACTCTCTCGAAACGACGCCATTTGACCACGTCGAGAACTTCGAGAATTTGAATCTCCACGCAACGCACCAGATTGTAGAGTCCTGGTCACGCGCCGCGCGCGTGCTGCTCGAGAGTGTTGCGGAGTCGGTGGAAGGAAGAAGGTTTGAGAAGGCGGCGAGGGAGTGCTACGCGGTGGAGCGGATCTGGAAGCTTCTATCGGAGATCGAGGACCTTCACTTATTGATGGATCCGAACGATTTCATGAAGCTGAAGAAGCAGATCGCGATTCGGGGTTTCGGCGATACGGCGGCGTTTTGCTTCCGATCGAAGGAGCTTGTGGAGGTGGCGAAGATTTGTAGGGAGATGAAGAGGATGGTACCGGGGATATTGGAGGTGGAGGTTGATCCGAAGGGAGGGCCGGGTATGGTGGAGGCGGCGATGAGGATTTACGCGGAGAAGAAGGCGGAGGGTGTGGTTGAGGTGCTGCAAGCGATGCTGGGGATAGAGGCGGCGATGAAGAGATTCTTCTACGATTACAAGCAGGTTGTAGCGGCGGTGATGGGAAGCGCGGAGGCTGGCGGGAACCGAGTTGATTCAGGTGACTCGCTAAGTCAGATATTCTTGGAGCCAACGTATTTTCCGAGCCTCGATGCGGCAAAGACGTTCCTGGGATATTATTGGGATAATCACGAAAATACCCTTACTTGGCACTAA 1365 0.5421 MVDLEWKSKMARSKINVHDPKSPKLAVSDKPVLQPNLPALQLPLTPNDIKTASFPLCEAYDNYLRLPQLRTLWDSNNFPRWAHEPIMKPALNGLEITFRFISTVLSDPRPYANKREWARRLESLAKAQVQLISTLCKDQEESPETCGEVPVRDVSSSGYRSYSEASLLPRLATWHRSKDVAQRILATVEAEMTRCSYTLGLGEPNLTGKPILRYDAVCMPNELHSLETTPFDHVENFENLNLHATHQIVESWSRAARVLLESVAESVEGRRFEKAARECYAVERIWKLLSEIEDLHLLMDPNDFMKLKKQIAIRGFGDTAAFCFRSKELVEVAKICREMKRMVPGILEVEVDPKGGPGMVEAAMRIYAEKKAEGVVEVLQAMLGIEAAMKRFFYDYKQVVAAVMGSAEAGGNRVDSGDSLSQIFLEPTYFPSLDAAKTFLGYYWDNHENTLTWH 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00897 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
Aip07g00897 454 Pfam Hs1pro-1 protein C-terminus 192 446 IPR009743 -
Aip07g00897 454 Pfam Hs1pro-1 N-terminus 1 189 IPR009869 GO:0006952
Aip07g00897 454 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 450 - -
Aip07g00897 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 440 IPR037217 GO:0019441|GO:0020037|GO:0046872
Aip07g00897 454 Gene3D - 214 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00897 Aip-Chr7 10538678 10540042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00897 - - adu:107490795 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00897 07 10538678 10540042 Aip07g00897 07 10538678 10540042 ECH
Aip10g01647 10 35236734 35238480 Aip07g00897 07 10538678 10540042 PCT