Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00892 ATGTCAAGACAGAAGCAAGGAGGTGAAGAAACCATGATGTCAAGCCTGAATGAAACAATTGAAAGAGAAGAAAGAGAGGAGTTGGAGAAAGAAGGTGGTGGCTCAGGTTCACATTCCTCCTTGAAAAGCCTTCTCTGGCATGGTGGTTCTGCTTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTAGCACAGGTTCTGTTAACACTGCCATACTCATTCTCACAGCTAGGGATGCTTTCAGGAATCATACTACAAATCTTCTATGGAATTCTTGGTAGTTGGACTGCTTATTTGATAAGCATTCTCTACATTGAGTACAGAACCCGCAAGGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAGGTGTTGGATGGACTCCTGGGACCTTACTGGAAAGCCGTTGGATTGGCATTCAACTGCACTTTTCTACTCTTTGGATCTGTTATCCAGCTGATAGCCTGTGCAAGTAACATATACTACATAAACGATCACTTGGATAAGAGAACATGGACATACATATTCGGAGCATGCTGTGCCACCACAGTCTTCATACCATCATTTCATAACTACAGGATTTGGTCCTTCCTTGGCCTTGCCATGACCACCTACACTGCTTGGTATTTAACCATTGCTGCCCTTCTTCATGGCCAGGTTGAAAATGTAAGTCACACGGGCCCAAACAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGCCATGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAGTATATCTATCTTTTTGCCACTATCTATGTGTTCACCCTCACTCTTCCATCTGCTATTGCTGTCTATTGGGCATTTGGTGACCAACTCTTAGACCATTCCAATGCCTTCTCCCTTCTTCCCCGCTCCGGCTGGCGCGACGCCGGCGTAATCTTAATGCTCATTCATCAGTTCATAACATTTGGATTTGCATGCACACCATTGTACTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAAAGCATATGTTTAAGGGCATTAGCAAGGTTACCAGTGGTGATACCAATATGGTTTTTGGCCATAATTTTCCCATTCTTTGGACCCATAAATTCAGCTGTTGGGGCACTTTTGGTTAGCTTCACAGTCTATATCATCCCTGCTTCTGCTCATATGCTCACTTACAAGTCTGCCTCTGCTAGACAGAATGCAGCAGAGAAATTGCCGGTGTTCATTCCAAATTGGACAGTAATGTTTGTTGTGAATGCATTTGTGGTGGTGTGGGTATTTGTGGTAGGGTTTGGATTTGGAGGGTGGGCAAGCATGACTAACTTCATCAAACAAGTTGACACATTTGGATTATTTGCTAAGTGCTACCAATGCCCACCAAAAATCTCTGCTTCCAATCACACAGCAACACTTCATCATTGA 1458 0.4376 MSRQKQGGEETMMSSLNETIEREEREELEKEGGGSGSHSSLKSLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGILGSWTAYLISILYIEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTAWYLTIAALLHGQVENVSHTGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATIYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYKSASARQNAAEKLPVFIPNWTVMFVVNAFVVVWVFVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKISASNHTATLHH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00892 485 PANTHER OS05G0424000 PROTEIN-RELATED 4 473 - -
Aip07g00892 485 Pfam Transmembrane amino acid transporter protein 47 440 IPR013057 -
Aip07g00892 485 MobiDBLite consensus disorder prediction 1 38 - -
Aip07g00892 485 PANTHER AUXIN INFLUX TRANSPORTER 4 473 - -
Aip07g00892 485 MobiDBLite consensus disorder prediction 1 15 - -
Aip07g00892 485 MobiDBLite consensus disorder prediction 16 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00892 Aip-Chr7 10416160 10423237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00892 18 470 Organic Solute Cotransporters AT2G21050 80.353 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00892 K13946 - gmx:100817572 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00892 07 10416160 10423237 Aip10g01633 10 34079028 34084926 ECH
Aip07g00892 07 10416160 10423237 Aip07g00892 07 10416160 10423237 ECH
Aip10g01633 10 34079028 34084926 Aip07g00892 07 10416160 10423237 PCT