Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00781 ATGGGAAAATCAATTCTCTCTGCGGTTAGGTTCCAAGAGTTGTGTCGCATCGTTTCATCATCTGCGAATGGGAATGCGAGGAGGACGGCGACAGCACAGAAGCAACAACCACAAAGGATGCAAACAAACACGGTTGCTGTCCCTTCTCTAAAACATGGTAAGATGGGAACATCGGAGGAACAATGTCGGATGCCACTGTCCCGTGTGGTCGCAGATTGTACCAATCGGTGGTTCCATGATACCCTTAAGGAGGCAAAGGCTGGTGACACCTCTATGCAGCTCCTTGTTGCTCAGATGTATTTCAGTGGATATGGGGTCCCCAAGGATCCTCAAAAGGGAAATGTTTGGATCGATAAAGCAGCTAGAAGTCGGAATTCAGTTTGGAAAGCATGTGATAAGCATATAGGTTACAGAACTAGTGATTCAGATTCATATGGACTGGAGAACGATGCTAAGTAA 459 0.4641 MGKSILSAVRFQELCRIVSSSANGNARRTATAQKQQPQRMQTNTVAVPSLKHGKMGTSEEQCRMPLSRVVADCTNRWFHDTLKEAKAGDTSMQLLVAQMYFSGYGVPKDPQKGNVWIDKAARSRNSVWKACDKHIGYRTSDSDSYGLENDAK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00781 152 SMART sel1 90 125 IPR006597 -
Aip07g00781 152 Gene3D Tetratricopeptide repeat domain 75 132 IPR011990 GO:0005515
Aip07g00781 152 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 151 - -
Aip07g00781 152 SUPERFAMILY HCP-like 83 123 - -
Aip07g00781 152 PANTHER EXPRESSED PROTEIN 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00781 Aip-Chr7 8507719 8508893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00781 - - gmx:100779520 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00781 07 8507719 8508893 Aip10g01445 10 25212862 25215609 ECH
Aip07g00781 07 8507719 8508893 Aip07g00781 07 8507719 8508893 ECH