Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00422 ATGGATTTGTCGGATGCCGTAATTGTCAAATCCAGTAGGTTGAAGTCTGTTGTATGGAATGATTTTGATAGAATTAAGAAAGGAGACACCTGTGTGGCAGTTTGTAGGCATTGTAAAAGGAAATTGAGTGGATCAAGTTCGAGTGGAACATCGCATTTGAGGAACCATTTAGTCAGGTGTCAGAGAAGGTCTAGCCATGGCATAGCTCAATATGTTACAGCTAAAGAAAAGAGAAAGGACACAACTGTCACTGTTGCAAACTTCAACTTTGATAATAAAGATCACAAAAAAGATGACCCCCTTAGCTTCGTCAATGTTAAATTGGACCAGGAGCAGTTGAAAGATGAAAATGTGAATGCTGGAAACTGTAACTTCGATCAAAGGCGGAGTCGATTTGATCTTGCTCGAATGATTATTCTACATGGATATCCGTTGGCTATGGTTGAACATGTGGGTTTCAGAGTATTTGTAAAAAATCTACAGCCTTTGTTTGAGCTTGTGACGATGAATAGGGTTGAGGCAGACTGTATTGAGATTTATGACAAAGAGAAACAGAAGGTGAATGAGATGTTGGATAAATTACCTGGGAAAATCAGCCTTGGTGCCGATGTGTGGACTACATTGAATGGTTCTGAATATTTATGCTTGACTGCAAATTATATAGATGAATCATGGTTGTTAAGGAGGAGGATTTTAAATTTTGTCACAATTGATCCTTCCCATACTGAAGACATGCTTTCGGATACTATCATGACTTGTCTGATGGATTGGGATATTGACCGGAAGCTGTTCTCCGTTATCTTGGATAGTACTACCGGCAATGACGTTGCAATAAGAATTGGGGAAAGACTTTCGCAAAACAGGTTTCTTTATTGTAATGGTCAATTATTTGATATACGCTGTGCTGCGAGTGTTCTACATGTCATGGTTCAGCATGCTCTGGTAGCTATTAGTGAATTAATCAGCAAGGTCAGAGAAAGTATTCGTTATGTTAGAAGTTCACAGACAGTACAAGCAAAGTTCGACGGGATGGCCAAAGAAGTCGGGATTAGGAGTCAAAAATGCCTAACTGTAGATAATCCATTCCAATGGAATACCACACATTCAATGCTTGAAGCTGTCTTAGAATTCAAGGATGTTTTTATTCTTTTGCAAGAAAATGATGATGGCTGCACAGTCAGCTTATCTGATGTAGAGTGGGACAGAGTCTCTGCCATTACTAATTACTTGAAACTTTTTGTGGAAGTTACAAATGTTTTCACCAGGAGCAAGTATCCAACTGCAAACATATATTTCCCTGAACTATGTGATGTCAAGTTGCATCTGATTGAATGGTGCAACAATTCTGATGAATATATTAGTTCTTTGGCATTAAGAATGCGGAGCAAGTTTGATGAATACTGGGAGAAATGTAGCTTAGGTTTGGCAGTTGCAGCCATGTTAGATCCGAGATTCAAGATGAAATTGGTAGAATATTACTATCCACAAATCTATGGTAGCACTTCTTCAGCTCGCATCAACGAGGTTCTTGACAGCGTGAAGGCTCTATACAATGAACATTCAATATGCTCGCCACTAGCTTTTCATGATGAGGGTCTGCCGTGGCAAGTTGGCAGTGTTCGACTTTCCTTACCGACTTCTGCAAAGGACTCTAGGGATAGACTCATGGGATTTGATAAATTTCTCAATGAAACTTCCCAGGGCGAAGGCATGAAATCCGATCTAGACAAGTACCTAGAAGAGCCTCTCTTTCCACGCAATGTTGAtttcagcatattgaattggtggaaagttcacactcccaggtatcctgtattatccatgatggcaagaaacatgctaggaattccgatgtcaaaagttccgccggagttggccttcaacaccgatggaagggttcttgatcgcgattggagttcgcttaatcctgctactatccaagcattggtttgttcacaagattggATAAGGAATGAATTAGAAAATTAA 1989 0.3555 MDLSDAVIVKSSRLKSVVWNDFDRIKKGDTCVAVCRHCKRKLSGSSSSGTSHLRNHLVRCQRRSSHGIAQYVTAKEKRKDTTVTVANFNFDNKDHKKDDPLSFVNVKLDQEQLKDENVNAGNCNFDQRRSRFDLARMIILHGYPLAMVEHVGFRVFVKNLQPLFELVTMNRVEADCIEIYDKEKQKVNEMLDKLPGKISLGADVWTTLNGSEYLCLTANYIDESWLLRRRILNFVTIDPSHTEDMLSDTIMTCLMDWDIDRKLFSVILDSTTGNDVAIRIGERLSQNRFLYCNGQLFDIRCAASVLHVMVQHALVAISELISKVRESIRYVRSSQTVQAKFDGMAKEVGIRSQKCLTVDNPFQWNTTHSMLEAVLEFKDVFILLQENDDGCTVSLSDVEWDRVSAITNYLKLFVEVTNVFTRSKYPTANIYFPELCDVKLHLIEWCNNSDEYISSLALRMRSKFDEYWEKCSLGLAVAAMLDPRFKMKLVEYYYPQIYGSTSSARINEVLDSVKALYNEHSICSPLAFHDEGLPWQVGSVRLSLPTSAKDSRDRLMGFDKFLNETSQGEGMKSDLDKYLEEPLFPRNVDFSILNWWKVHTPRYPVLSMMARNMLGIPMSKVPPELAFNTDGRVLDRDWSSLNPATIQALVCSQDWIRNELEN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00422 662 Pfam BED zinc finger 16 60 IPR003656 GO:0003677
Aip07g00422 662 PANTHER BED FINGER-RELATED 2 659 IPR045259 -
Aip07g00422 662 Pfam hAT family C-terminal dimerisation region 574 656 IPR008906 GO:0046983
Aip07g00422 662 SUPERFAMILY beta-beta-alpha zinc fingers 16 62 IPR036236 -
Aip07g00422 662 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 2 659 - -
Aip07g00422 662 SUPERFAMILY Ribonuclease H-like 184 658 IPR012337 -
Aip07g00422 662 Pfam Domain of unknown function (DUF4413) 422 520 IPR025525 GO:0003677
Aip07g00422 662 ProSiteProfiles Zinc finger BED-type profile. 13 66 IPR003656 GO:0003677
Aip07g00422 662 SMART bed5 13 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00422 Aip-Chr7 3589512 3592467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00422 - - gmx:106799808 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00422 07 3589512 3592467 Aip07g00422 07 3589512 3592467 ECH