Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00294 ATGGAGTCGCCGCCATTCCATTTCTACTCTGCTTCGCGACCCACCATCTCTCTCCCTTCATATTCTTCTTCTTCATTCCTTTTTCTTCATAAAAATCCTTCATTCATAAAAACCTCACGTTCCACCAACGTCAGCTACTCAAGAAGCTTCTCTGTTCGTGCTTCTTCTTCTTCTACCAGTGATTCTGTGGTGACTCTGCTTGATTATGGGGCTGGCAATGTTCGAAGTGTTAGGAATGCTATCAAGCACCTTGGTTTTGATATCAAAGATGTGCAAACTCCAGAAGACATTTTGAATGCAAGCCGGCTTATATTTCCTGGTGTTGGAGCATTCGGCAATGCCATGGATGTCTTGAACAAGACAGGAATGGCTGAAGCACTGTGTGCATATATCGAAAAGGATCGCCCATTTTTAGGGATTTGTCTTGGACTTCAACTACTTTTTGAATCCAGTGAGGAGAATGGACCAGTAAAGGGTCTTGGCCTGATCCCTGGAACTGTTGGGCGATTTGATTCATCAAATGGTTTTAGAGTCCCGCATATTGGCTGGAATGCTTTACACATTACAAAGGACTCGGGAATTTTGGATGATGTTGGAAAACGCCATGTATATTTTGTGCACTCTTACCGTGCCATGCCTTCTGATAACAACAAAGAATGGGTCTCCTCCACCTGCAACTATGGTGATACATTTATAGCATCTATTAGACGAGGAAATGTGCATGCAGTTCAATTCCATCCAGAAAAGAGTGGAGATGTTGGTCTTTCTATTTTGAGGAGATTTTTGTATCCAAAGTCGCAAATGACAAAGAAGCCTGGTGAAGGGAAAGCCTCAAAACTTGCACAAAGGGTGATTGCTTGTCTCGATGTGAGGGCAAATGATAAGGGAGACCTTGTTGTAACCAAAGGAGACCAGTATGATGTAAGAGAAAACACAAATGAGAAGGAGGTGAGGAATCTTGGAAAGCCAGTTGAGCTTGCTAGACAGTACTATTTAGATGGTGCTGATGAGGTATGCCTTTTACCTTTCCATTCAATACACGTATTGAAATACACATCAGAAAATGTTTTTGTACCCTTGACAGTTGGGGGTGGGATTAGAGATTTTACAGATGCGAATGGCAGGCACTACACTAGTTTGCAAGTTGCTTCAGAATATTTTAGGTCCGGAGCTGATAAGATATCCATTGGAAGTGACGCAGTTTATGCTGCAGAAGAATATCTGAGAACTGGAGTGAAAACTGGAAAGACCAGCTTAGAGCAGATTTCCAGAGTTTACGGAAATCAGGCAGTGGTGGTTAGTATCGATCCTCGTAGGGTGTATGTAAAGAATCCCACAGATGTTCAGTTCAAGACTATAAGGGTGTCAAATCGAGGTCCAAATGGAGAGGAATATGCCTGGTATCAGTGTACAGTAAATGGAGGGCGAGAAGGCCGGCCGATAGGTGCTTATGAGTTAGCGAAAGCAGTTGAAGAACTTGGTGCCGGAGAAATACTACTCAACTGCATAGACTGTGATGGTCAAGGAAAAGGATTTGATATAGATTTAGTTAAGTTGATCTCAGATGCTGTAAGTATCCCGGTGATCGCAAGTAGTGGTGCCGGTGCTGCTGAACACTTCTCTGAGGTGTTCGCGAAAACAAATGCTTCTGCTGCGCTTGCTGCCGGCATTTTTCACAGAAAGGAGGTGCCTATTCAAACTGTAAAAGAGCATTTGTTGAAGGAAGGTATAGAAGTCCGAATCTGA 1746 0.4318 MESPPFHFYSASRPTISLPSYSSSSFLFLHKNPSFIKTSRSTNVSYSRSFSVRASSSSTSDSVVTLLDYGAGNVRSVRNAIKHLGFDIKDVQTPEDILNASRLIFPGVGAFGNAMDVLNKTGMAEALCAYIEKDRPFLGICLGLQLLFESSEENGPVKGLGLIPGTVGRFDSSNGFRVPHIGWNALHITKDSGILDDVGKRHVYFVHSYRAMPSDNNKEWVSSTCNYGDTFIASIRRGNVHAVQFHPEKSGDVGLSILRRFLYPKSQMTKKPGEGKASKLAQRVIACLDVRANDKGDLVVTKGDQYDVRENTNEKEVRNLGKPVELARQYYLDGADEVCLLPFHSIHVLKYTSENVFVPLTVGGGIRDFTDANGRHYTSLQVASEYFRSGADKISIGSDAVYAAEEYLRTGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYVKNPTDVQFKTIRVSNRGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLVKLISDAVSIPVIASSGAGAAEHFSEVFAKTNASAALAAGIFHRKEVPIQTVKEHLLKEGIEVRI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00294 581 Gene3D - 59 284 IPR029062 -
Aip07g00294 581 CDD GATase1_IGP_Synthase 66 262 IPR010139 GO:0000105|GO:0016763
Aip07g00294 581 SUPERFAMILY Ribulose-phoshate binding barrel 279 580 IPR011060 -
Aip07g00294 581 SUPERFAMILY Class I glutamine amidotransferase-like 63 263 IPR029062 -
Aip07g00294 581 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 63 271 - -
Aip07g00294 581 CDD HisF 283 575 IPR004651 GO:0000105|GO:0000107
Aip07g00294 581 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 63 264 IPR010139 GO:0000105|GO:0016763
Aip07g00294 581 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 75 581 - -
Aip07g00294 581 Gene3D Aldolase class I 285 581 IPR013785 -
Aip07g00294 581 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 64 262 IPR010139 GO:0000105|GO:0016763
Aip07g00294 581 Pfam Glutamine amidotransferase class-I 66 261 IPR017926 -
Aip07g00294 581 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 75 581 - -
Aip07g00294 581 Pfam Histidine biosynthesis protein 283 563 IPR006062 GO:0000105
Aip07g00294 581 PIRSF IGPS_HisHF 61 581 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00294 K01663 - qsu:111998074 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00294 07 2695819 2700823 Aip07g00294 07 2695819 2700823 ECH