Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00264 ATGAAGAAAAAAACATGCTGTCTAAGAAAAGAATGCATTGCTTCGTTCCTAATAATATTAATGAAGACAACATTCTTCTTCCCTTGTGAGGCATTCAACTATGGCGAAGCCTTGTCAAAGAGCCTTCTCTACTTCGAGTCACAGCGTTCAGGTCGCTTACCTTACAATCAAAGGGTCACTTGGCGCCACCATTCTGGTCTCACCGATGGTCTTGAACAAGGGGTGGACTTAGTTGGAGGATACTATGATGCTGGGGACAATGTTAAATTTGGGTTACCCATGGCTTTCACCGTGACAATGCTCTCATGGGGTGCCATGGAATACGGCGAACAGCTCGCCGGTGCCGGCGAGTATGTTCACGCGCTTGAAGCCATCAAGTGGGGGACTGATTATTTCATCAAGGCTCATACTCACCCAAATGTCCTCTGGGTTGAGGTGGGTGATGGAGACACCGATCACTATTGTTGGCAGCGGCCGGAGGACATGACAACATCACGGCGAGCTTATAAGGTTGATGCAAACAACCCCGGCTCGGATGTTGCTGGCGAAACGGCGGCGGCATTGGCGGCGGCTTCCATTGTGTTTAGGAGAACAAACCCACACTATTCTCAACTACTTTTGCATCATGCAAAACAGTTGTTTGAGTTTGGTGAGAAGTACAAGGGGAAATATGATGAGAGTGTTGGAGTGGCAAAAGGGTATTATGCTTCAGTTAGTGGGTACATGGATGAGTTGCTTTGGGCAGCAATTTGGCTATATAGCGCCACACAAAAGGAACAATATTTCATGTATTTCTTGGACAATGCCAAACACTTTGGTGGGACCACTTGGTTCATCACTGAATTCAGCTGGGATGTAAAGTATGCTGGTCTTCAAGCCATTGCTTCCATGCTCTTAATGGAAGAAAAGCATAAGAAACATGAATTGATACTCGAAGAGTATCGATCAAAGGTAGAGCACTACCTTTGTGCATGTCTTGGCCTCAACCAAGACAACAACACTAACGTAGACCGCACCCCGGGCGGTCTACTATACATCCGCCAATGGAACAACATGCAATACGTATCGACGGCCACATTTCTTCTAACAGTTTACTCTGATCATCTTCTAGCCGTAGATCAAAAGCTGACGTGTCCAAAAGGAGTAGTGGGTCCCAACAATCTCTTAACATTTGCAAAATCACAAGTTGATTACATCTTGGGTTCGAATCCAACGGGTATGAGCTACTTGGTAGGGTACGGTACAAGTTTTCCAGTGAGGGTGCACCATAGGGGTGCATCCATTGAATCATATAGAGGGAACAAGGGTTTTATAGGGTGCACTCAAGGGTATGATAATTGGTATGGAAGGCATGATCCTAACCCTAACATTCTTGTTGGGGCCCTTGTTGGGGGCCCAGATATCAAAGACAATTTCAAAGATGAGAGATCCAATTACATGCAAACTGAGGCATGTACCTATAACACTGCACCACTAGTAGGGGTTTTTGCAAGGTTGCATGGATCACAAACTCATTTTCATCACAATTACAATGATACCTTTCTGGTAGCATCTAGTTAA 1560 0.4532 MKKKTCCLRKECIASFLIILMKTTFFFPCEAFNYGEALSKSLLYFESQRSGRLPYNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWGAMEYGEQLAGAGEYVHALEAIKWGTDYFIKAHTHPNVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDANNPGSDVAGETAAALAAASIVFRRTNPHYSQLLLHHAKQLFEFGEKYKGKYDESVGVAKGYYASVSGYMDELLWAAIWLYSATQKEQYFMYFLDNAKHFGGTTWFITEFSWDVKYAGLQAIASMLLMEEKHKKHELILEEYRSKVEHYLCACLGLNQDNNTNVDRTPGGLLYIRQWNNMQYVSTATFLLTVYSDHLLAVDQKLTCPKGVVGPNNLLTFAKSQVDYILGSNPTGMSYLVGYGTSFPVRVHHRGASIESYRGNKGFIGCTQGYDNWYGRHDPNPNILVGALVGGPDIKDNFKDERSNYMQTEACTYNTAPLVGVFARLHGSQTHFHHNYNDTFLVASS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00264 519 Pfam Glycosyl hydrolase family 9 34 495 IPR001701 GO:0004553|GO:0005975
Aip07g00264 519 Gene3D - 30 502 IPR012341 GO:0005975
Aip07g00264 519 PANTHER ENDO-1,4-BETA-GLUCANASE 9 506 - -
Aip07g00264 519 PANTHER ENDOGLUCANASE 9 506 - -
Aip07g00264 519 SUPERFAMILY Six-hairpin glycosidases 32 502 IPR008928 GO:0005975
Aip07g00264 519 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 398 424 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00264 Aip-Chr7 2246747 2250770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00264 10 498 Glycoside Hydrolase AT2G32990 72.490 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00264 - - gmx:100786912 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00264 07 2246747 2250770 Aip07g00264 07 2246747 2250770 ECH