Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00262 ATGGCTCATTCTCTTGCATTGTTTTTTTCATTATTAATCTTCATTCTTTCAATCACTTCGGAAGCTGCACCTTCCATCGGAATCAACTATGGCAGGGTGGCTAATGATCTACCACCGCCTTCCAAGGTCGTGCAGCTTCTCAAGTCACAGGGAATAACACATGTCAAGCTCTACGACACCGACGCCACCGTCCTCTCCGCACTTTCCAACACCGGAATCAAGGTTGTTGTAGCCATGCCTAACGAGCTTCTCTCCTCCGCCGCCGGAGACCAGTCCTTCGCCGATAACTGGGTGAAGGCCAACATCTCAGCCTACCACCCCGCCACACAAATCGAAGCCATTGCCGTCGGAAACGAAGTCTTCGTGGACCCTAACAACACCACCAACTACCTCGTTCCCGCCATGAACAACGTCTACAACTCCCTCAAGAAACTCAACCTCCATAACGACATCAAAATCTCGTCCCCGATCGCACTCTCCGCTCTCTCCTCCTCATACCCTACCTCCTCCGGTTCGTTCAAATCAGACCTGGTCGAACCGGTCATCAAACCAATGCTCGAGTTTCTCAGAAAAACCGGATCCTACTTAATGGTGAACGCGTACCCTTTCTTCGCGTACGCTGCTAACAGCGATAAAATCAATCTCAGTTACGCGCTCTTCGAGAACAATCCAGGGGTGGTTGATTCCGGTAACGGTTTCAAGTATAACAGTTTGTTCGACGCGCAAGTCGATGCGGTGAATGCTGCCACGTCAGCACTCCAATACGGCGACATAAAGATTGTCGTTTCGGAAACGGGTTGGCCTTCCAAAGGGGATTCCAATGAGATTGGAGCGAGTGAGGCCAATGCGGCGTCGTATAACGGAAATCTCGTTAAGCGTGTTTTAAATGGGAGTGGGACCCCCTTAAGGCCCAATGACCCACTTAACGTTTTTCTATTCGCGCTTTTTAACGAGAACCAGAAGCCCGGGCCCACTTCCGAAAGGAATTACGGGCTTTTTTATCCAACCGAGCAGAAGGTTTATGATATTCCTCTTACCGTGGCGGAGGTGGCGGCGGCGCCATCGTCTGAGGTCGGGAAGAGCCAGGTGCCGACGAAGGGAGGCACGTGGTGTGTGGCGAACGGTGGTGCTGGGGCGGAGAAGCTTCAGGCGGCGCTTGATTATGCTTGTGGAGAGGGTGGTGCTGATTGCGCTCCGATTCAGAAGGGTGCCACGTGTTACGATCCTAACACGTTGGAGGCGCACGCTTCGTATGCTTTTAACAGTTACTATCAGAAGATGTCACGTGCCTCTGGCACGTGCAATTTTGGCGGTGCTGGTTATGTTGTTACCCAACCTCCTAGATTTGGGAAGTGTGAATTCCCCACTGGATACTGA 1377 0.5178 MAHSLALFFSLLIFILSITSEAAPSIGINYGRVANDLPPPSKVVQLLKSQGITHVKLYDTDATVLSALSNTGIKVVVAMPNELLSSAAGDQSFADNWVKANISAYHPATQIEAIAVGNEVFVDPNNTTNYLVPAMNNVYNSLKKLNLHNDIKISSPIALSALSSSYPTSSGSFKSDLVEPVIKPMLEFLRKTGSYLMVNAYPFFAYAANSDKINLSYALFENNPGVVDSGNGFKYNSLFDAQVDAVNAATSALQYGDIKIVVSETGWPSKGDSNEIGASEANAASYNGNLVKRVLNGSGTPLRPNDPLNVFLFALFNENQKPGPTSERNYGLFYPTEQKVYDIPLTVAEVAAAPSSEVGKSQVPTKGGTWCVANGGAGAEKLQAALDYACGEGGADCAPIQKGATCYDPNTLEAHASYAFNSYYQKMSRASGTCNFGGAGYVVTQPPRFGKCEFPTGY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00262 458 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Aip07g00262 458 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Aip07g00262 458 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 451 IPR044965 GO:0004553|GO:0005975
Aip07g00262 458 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 10 451 - -
Aip07g00262 458 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
Aip07g00262 458 Gene3D - 365 453 - -
Aip07g00262 458 SMART X8_cls 369 454 IPR012946 -
Aip07g00262 458 Gene3D Glycosidases 24 351 - -
Aip07g00262 458 Pfam X8 domain 369 440 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00262 Aip-Chr7 2229558 2231442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00262 26 458 Glycoside Hydrolase AT4G26830 69.746 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00262 - - gmx:100803406 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00262 07 2229558 2231442 Aip07g00262 07 2229558 2231442 ECH