Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00256 ATGGAGCTCTGTTCTCGAACCTTAACAACTCTTCTTCATCGCACTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAACTCTCTTCTTCGTGCAACTACTTGTAACTATGCAACACCTTCCAAATCCAGCAACTACTTCAACCTCTCATCATCTCATTATCATAATCATCATGTTCTTCACCACTTCCAACAACAACCCTTTCTCTTTCACCATTATCACGGTAGTTTTTCTCCCTTCACTGTTTCAGCTTCTTCTTCTTCGGCGGCTGCTTCTTCCACAGAAGAGAAAATGGACCGTCTTCCGGCAGAGTTGAACGTCACCGAAACACAAGAACCCAATTCCAGAGTTAGACTTCAAGTGGAGGTGCCACCAGTTGTCTGTGAGGATTGTTACAAAAGGGTCATATCTGAGTTTACAAAGCAAGCAAAGGTCCCCGGATTCCGCCCCGGAAAGCCGGTTCCAGAAAGTATTCTTGTCGGTTACGTCGGGCGCAAAAATGTTCAGAAGGCCACAATCGAATCTATATTGAGGAGAACACTTCCACATGCTATGACTTCAGTTACCAGAAAGGCTTTGCCGGACTCTGTGCGTATAGTGACTAAATTTTCTGAGTTGGAGAAAACATATTCTTCTCAAGGGAGTCTTAGATATGATGTCCTTGCTGATATTGTACCTGAAATCAAATGGGTTCCTGATAATGGATACAAGAATCTGAAAATTGTTGTTGAAATAGACAGTGATATTGATGCTCAGAAAGCATCTGAACAAGAATTCAAAAGGCGTCACAAATCCATTGGTGCGCTGAAGGTTGTTGCTGACAGAGGACTACAGGCTGGTGATGTTGTTGTCATTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAAGATTAAAAATATTCCTTCTGCTGAAAGTAAAGGATTTAACTTCGATACAGAAGATGGTTACAGAATATTGCCCGGTTTCCTTGATTCTATAATTGGAATTCGTCCGGGTGAAACAAAGTCATTTCCTCTTGTGTTTCCTGAAACATGGAATCAAGAAAATCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTATTTTACAGAGATTTGCCGGAACTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACGACAGTGCAACAGGTCAAAGACCTATTGTTGCAGAGATGTCAAGAGGTGGAGCAATCAGCTAGAGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCCAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTATATGGAGCCAGCCTTTTAGAAATACAGGCGAAGATGAATCTAAATGACCAGCAATTGGCTTCTCTGTCAAGTCAAAAGGCTGTGAATGAATATCTTGAGCATCAGAAGGACAATATAAGAAATTTGATAAAACAGAATCTGGCCGTTGGTGATATATATAGGCGCGAAAATCTGCAGTTCTCCACTGAGGACCTTGTCAAGGAGGTTGAGAATTCCATCACCGAATTCAAACGTCAAAATCAAGAATATGATGAGGAAAGGGTAAAGGATCAGGTCCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATGTAACCAGATGA 1671 0.4123 MELCSRTLTTLLHRTSPSSSSSSSSSNSLLRATTCNYATPSKSSNYFNLSSSHYHNHHVLHHFQQQPFLFHHYHGSFSPFTVSASSSSAAASSTEEKMDRLPAELNVTETQEPNSRVRLQVEVPPVVCEDCYKRVISEFTKQAKVPGFRPGKPVPESILVGYVGRKNVQKATIESILRRTLPHAMTSVTRKALPDSVRIVTKFSELEKTYSSQGSLRYDVLADIVPEIKWVPDNGYKNLKIVVEIDSDIDAQKASEQEFKRRHKSIGALKVVADRGLQAGDVVVIDISATTIDQDESKIKNIPSAESKGFNFDTEDGYRILPGFLDSIIGIRPGETKSFPLVFPETWNQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLQRCQEVEQSAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGASLLEIQAKMNLNDQQLASLSSQKAVNEYLEHQKDNIRNLIKQNLAVGDIYRRENLQFSTEDLVKEVENSITEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYVTR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00256 556 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 93 555 IPR005215 GO:0015031
Aip07g00256 556 Gene3D - 235 551 IPR037041 GO:0006457|GO:0015031
Aip07g00256 556 SUPERFAMILY Trigger factor ribosome-binding domain 105 243 IPR036611 GO:0006457|GO:0015031
Aip07g00256 556 Pfam Bacterial trigger factor protein (TF) C-terminus 388 545 IPR008880 GO:0006457|GO:0015031
Aip07g00256 556 Gene3D - 265 372 IPR046357 GO:0003755
Aip07g00256 556 Gene3D - 103 228 IPR036611 GO:0006457|GO:0015031
Aip07g00256 556 Coils Coil 506 526 - -
Aip07g00256 556 Hamap Trigger factor [tig]. 105 552 IPR005215 GO:0015031
Aip07g00256 556 SUPERFAMILY FKBP-like 271 375 - -
Aip07g00256 556 Pfam Bacterial trigger factor protein (TF) 106 245 IPR008881 GO:0006457|GO:0015031
Aip07g00256 556 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 374 554 IPR027304 -
Aip07g00256 556 TIGRFAM tig: trigger factor 116 545 IPR005215 GO:0015031
Aip07g00256 556 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 93 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00256 Aip-Chr7 2167747 2172171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00256 K03545 - gmx:100812597 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00256 07 2167747 2172171 Aip07g00256 07 2167747 2172171 ECH