Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00253 ATGTCGAACGAGAACGAACCGGCGAAGCTGCTATTACCGTACCTTCAACGCGCCGATGAGCTGCAAAAGCATGAGCCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAGCGAGGATTAAAGATTCCGCAAAGTGAACGCACCAAGACCACCAATGCTCTGCTTGTTTCGCTCATGAAGCAGCTCGAGAAGGATAAGAAGTCAATCCAGATTGGACCAGAGGATAATCTATATATTGAGGGATTTGCCTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGACTTGAATACAGCAAAAACATTTTATGCAGCTAGCATCTTTTTCGAGATTCTTAATCAATTTGGAGCACTTCAACCTGATCTGGAACAGAAACAGAAATATGCTGCCTGGAAAGCAGCAGATATAAGAAAGGCTGTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCACCGGCTGGTGATGATGACCTTTCATTTTTACCGAGTACTCCTAATACTACACCTAATGTTGACACCAATGAAACTACTGCAAGTCCTGGACCAGAATCCGATCCGTCACCTAGTTATCATAACCCTGTTGACTACCATAATCTCCCAAGCTCTCATTCTGCACCTCAATTCCATGATACTGCTAATGACCAGCATTTGCCAAACATTCCACCATCTATGCAGTTTCATGATAGAGTAAACAATAATAAGCATTCTTCCAGTGTTTCTCCATCTTCTCAACCTTACACACCTTTCTATCCTTCTCAAGATTACCATCCTCCTCCTCCTTCCCAAGATTATCATTCTCCTCCACCCTCGCAAGATTACCATCCTCCTCCTCCTTCCCAAGATTATCATCCTCCACCACCTGCCCAAGATTACCATTCTCCCCCACTTGCTAGATCAGATAGCTCTTATTCTGAGCCTTACAACCATCAGCAGTACTCACCAGAACACTCACAGCATTTAGGCTCAAACTACCCTTCTCAAGAACCTCCATCTTCGCACTCGTATCCACACTTTCAATCGTACCCAAGTTTTACAGAAAGCAGCCTACCATCAGTCCCTTCGAACTATACTTATATTCAAGGGCCTGATCCTTCATACTCTTCACAGTCTGCTCCTCTTACCACGAGTCATTCACCAATTGCTCAGCATAGTTCTGGGAACAAAAACGGAAATATCTCAAACACTCAGACATATCAGTATGACAGTAACTACCAGCCAGCACCTGAGAAAATAGCAGAGGCGCATAAGGCCGCAAGATTTGCTGTGGGGGCACTTGCATTTGATGATGTCTCAGTTGCAGTAGACTTCTTGAAGAAATCACTTGAGTTACTGACAAATCCATCAGCTGGTCAATGA 1371 0.4449 MSNENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQIGPEDNLYIEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEQKQKYAAWKAADIRKAVKEGRKPTAGPPAGDDDLSFLPSTPNTTPNVDTNETTASPGPESDPSPSYHNPVDYHNLPSSHSAPQFHDTANDQHLPNIPPSMQFHDRVNNNKHSSSVSPSSQPYTPFYPSQDYHPPPPSQDYHSPPPSQDYHPPPPSQDYHPPPPAQDYHSPPLARSDSSYSEPYNHQQYSPEHSQHLGSNYPSQEPPSSHSYPHFQSYPSFTESSLPSVPSNYTYIQGPDPSYSSQSAPLTTSHSPIAQHSSGNKNGNISNTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVDFLKKSLELLTNPSAGQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00253 456 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 306 454 IPR044538 GO:0032511
Aip07g00253 456 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 322 IPR044538 GO:0032511
Aip07g00253 456 MobiDBLite consensus disorder prediction 165 190 - -
Aip07g00253 456 MobiDBLite consensus disorder prediction 147 406 - -
Aip07g00253 456 Pfam Vta1 like 13 148 IPR039431 -
Aip07g00253 456 Pfam Vta1 C-terminal domain 413 450 IPR041212 -
Aip07g00253 456 MobiDBLite consensus disorder prediction 256 297 - -
Aip07g00253 456 MobiDBLite consensus disorder prediction 199 255 - -
Aip07g00253 456 MobiDBLite consensus disorder prediction 300 406 - -
Aip07g00253 456 Gene3D - 4 152 IPR023175 -
Aip07g00253 456 Gene3D Immunoglobulin FC, subunit C 412 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00253 1 118 Glycosyltransferase AT2G31960 25.984 7.64e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00253 K12199 - gmx:100783739 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00253 07 2149662 2151963 Aip07g00253 07 2149662 2151963 ECH