Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00213 ATGAATACGTGGGAGAATGGGACAGATTGCTGCTCATGGATGGGTGTCACGTGCAACTCTGTGTCTGGTCACGTGATTGGCCTCGATCTCAGTTGTGGTGCACTTGTAGGTAATATGGATCCCAATAGCACTCTTTTTCATCTTACTCATCTCCAAACACTCAGCCTTGCTTTCAATTCTTTCAATTATTCTCCATTGTCATCTCAGTTTGGTAGGTTTGTGAGTCTCACACACTTGAATTTATCTCATTGTGAATTCATAGGTGAAATTCCTTCCCAAATCTCACACCTTTCCAAATTACAATCACTTGATCTCTCTTCTTTTTATCATGGTTTAATGTGGGAAGAAACTACTTTGATGAGGTTGCTGCAAAACACAACATATTTAAGAGAGATTGTATTGGATGAAACAGATATGTCTTCAATTGTTCCAACAACAAACCCTTTGTCTTTTATTGCCAACTTGTCTTCCACTTTAGTTACTCTCAGTCTTTTTTATACTGGAATAAGGGGTTCTTTGACAAATGACATACTTTGTTTACCCAATCTTCAACACCTCATTCTATCAAAGAATGAATTGTCACTCCATCTTTCCGAGTTAAGTTGTACCACTTCTCTTAGTGTCTTGGATCTTTCAAATTGTGGTATCCAAGGGCCTATCTCTTCATCATTCTCTAATCTAACATACCTCACTTCCTTGAATTTGGCGTATAATCAACTCAACGGTTCAATCCCGTCATCACTTTCAAACCTTCAGCATCTCATTCACTTGGATCTTTCAAGCAATGAGTTTAGTGGTCAAATTCCAAATGTGTTTGATAGGCTAACCAATTTGCAATCCCTTGGCCTTTCGGATAATAATTTCCAAAGGAAGTTGCCATCCTCATTATTTGCCTTAACTCAACTCTCTACCTTGTATTGTTCTTATAATGAAATTGAGGGACCACTACCTGACAAAGTAGCCTTTTTAAATCTCACTCAATTATACTTACAAGGCAACTTATTAAATGGAACAATTCCTGAGTGGGTCTTATCCCTCAAGTCTTTGAGATACTTAGATCTGTCAAATAACAGATTCAGAGGGCACATAAGTGAAATCACATCTTATTCTTTGAAGTATTTAGACATGTGCAACAATGAGCTCCAAGGAAATTTTCCAGAATCGATTTTCCATCTTGTCAACCTTACTGATTTGTGCTTGTCTTCAGATAACTGGAGCGGTATTGTCCACTTCGCACTCTTCTCTAAGCTTCAAAACTTGGAGTATCTTTATCTTTCAGGTTGTACTTCACTATTGCTAAAATCTGAAACTAGTGTGAGTCACACTTTCTCCAATTTGAAGACACTGCAGTTGCTTTCTAGTAATATTACTGGTTGGTTGGAATTCTCAGGAAAATTTCCAAATTTATATTATCTTGAATTGTCTAGCAATAGTCTTCAGGGAAAAGTGCCAGAATGGATACATGGTATGGATTCATTAACTTATTTGAATCTCTCACACAACAATGTTACATTGATGGACCATTTTCCATGGTATCGACTTGAATACCTTGATCTTAGTTTCAACTCGATGGCTGATGACATTTCTTCCTTCTTTTGTAATGCAACCTTTCTGGAAGGTATCAACTTGTCCCACAACAAATTCACAGGAATATTTCCACAGTGCCTTGTCAATGGCTCATTACTTAAAGATTTGGATCTACAAATGAACAAACTTCATGGAACTTTGCCAGATACCTTTCCGGATCTTCTTACACTGAATCTCAATGGCAACAATTTCAAAGGTCTATTGCCGAAATCTTTGTCCAATTGCTCAATACTTATGGATTTGGATCTCGGTAACAATCAATTTGAGGACACATTTCCGAATTGGCTTCAATATATATCAAATTTGGAAATACTGGTCTTACGAGGCAATAAGTTGTACGGTCAGATTTCAAATTTGGAATCTGAAAACATATTTCCAAATCTGATTATTTTTGACATATCATGTAATAACTTTAGCGGCTCATTACCAAAAGCATACATACAAAATTTTCGAGCCATGAAGATTGTTGATGATGTGCAAAGCAGTTTGTCTTATATTGGAACAAATTGGTACCCATCAGGATATGACATTTCTATGGTTGCAACAATTAAAAGAGTCAGTCTTACTTTTACGAAAATTCCAAAGGCCTTTGTAATTATCGATTTGTCAGAAAACAAATTTGAAGGAGAGATTCCAGATGTTATTGGAGAGCTTCATAGACTCAAAAGCCTCAACCTTTCATATAACAACCTCATTGGTCCTATTCCCCGCTCTTTGGGAAATTTGACAAATCTTGAATCATTGGACCTCTCCTCAAAATGCTTGATGGGAGATATTCCTACTGAATTGACTGCTGAATTGACCAATCTGAACTCTCTTGAAGTACTTAATCTTTCCAACAACCATCTTGAAGGATCAATACCTCAAGGAAAACAGTTTGATACATTCTCAAATGATTCCTATGAGGGAAACATTGGGCTATGCGGATTACCATTGTCAATTCAATGCAACAATGTCCCTTTGCAACAATGTCCATCTTCTGAGGCTAAAGACAAATTCGGATTTGGTTGGAAACCAGTGGCAATAGGATATGCATGTGGAATGGTACTTGGAATAGGATTGGGATATTGTGTTTTCTCAATTGGAAAGCCTGAATGGCTAGTGGTCCTCTTTGGAGGTAAAAGGACCAAAAGGAGGAGCCGTGGAAACCGCCGGCGTGCAAGAACAACTCTGTTTCAGCTTTTTGTTGTAATGTAA 2784 0.3739 MNTWENGTDCCSWMGVTCNSVSGHVIGLDLSCGALVGNMDPNSTLFHLTHLQTLSLAFNSFNYSPLSSQFGRFVSLTHLNLSHCEFIGEIPSQISHLSKLQSLDLSSFYHGLMWEETTLMRLLQNTTYLREIVLDETDMSSIVPTTNPLSFIANLSSTLVTLSLFYTGIRGSLTNDILCLPNLQHLILSKNELSLHLSELSCTTSLSVLDLSNCGIQGPISSSFSNLTYLTSLNLAYNQLNGSIPSSLSNLQHLIHLDLSSNEFSGQIPNVFDRLTNLQSLGLSDNNFQRKLPSSLFALTQLSTLYCSYNEIEGPLPDKVAFLNLTQLYLQGNLLNGTIPEWVLSLKSLRYLDLSNNRFRGHISEITSYSLKYLDMCNNELQGNFPESIFHLVNLTDLCLSSDNWSGIVHFALFSKLQNLEYLYLSGCTSLLLKSETSVSHTFSNLKTLQLLSSNITGWLEFSGKFPNLYYLELSSNSLQGKVPEWIHGMDSLTYLNLSHNNVTLMDHFPWYRLEYLDLSFNSMADDISSFFCNATFLEGINLSHNKFTGIFPQCLVNGSLLKDLDLQMNKLHGTLPDTFPDLLTLNLNGNNFKGLLPKSLSNCSILMDLDLGNNQFEDTFPNWLQYISNLEILVLRGNKLYGQISNLESENIFPNLIIFDISCNNFSGSLPKAYIQNFRAMKIVDDVQSSLSYIGTNWYPSGYDISMVATIKRVSLTFTKIPKAFVIIDLSENKFEGEIPDVIGELHRLKSLNLSYNNLIGPIPRSLGNLTNLESLDLSSKCLMGDIPTELTAELTNLNSLEVLNLSNNHLEGSIPQGKQFDTFSNDSYEGNIGLCGLPLSIQCNNVPLQQCPSSEAKDKFGFGWKPVAIGYACGMVLGIGLGYCVFSIGKPEWLVVLFGGKRTKRRSRGNRRRARTTLFQLFVVM 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00213 927 SUPERFAMILY L domain-like 4 196 - -
Aip07g00213 927 Pfam Leucine Rich Repeat 75 97 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine Rich Repeat 801 817 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515
Aip07g00213 927 PRINTS Leucine-rich repeat signature 799 812 - -
Aip07g00213 927 PRINTS Leucine-rich repeat signature 349 362 - -
Aip07g00213 927 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 3 335 - -
Aip07g00213 927 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 268 877 - -
Aip07g00213 927 SMART LRR_typ_2 251 274 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 346 373 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 490 513 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 799 827 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 747 771 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 580 603 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 275 299 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 227 250 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 48 72 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 73 97 IPR003591 -
Aip07g00213 927 SMART LRR_typ_2 180 204 IPR003591 -
Aip07g00213 927 SUPERFAMILY L domain-like 510 842 - -
Aip07g00213 927 SMART LRR_sd22_2 747 773 - -
Aip07g00213 927 SMART LRR_sd22_2 180 202 - -
Aip07g00213 927 SMART LRR_sd22_2 346 368 - -
Aip07g00213 927 SMART LRR_sd22_2 628 650 - -
Aip07g00213 927 SMART LRR_sd22_2 48 68 - -
Aip07g00213 927 SMART LRR_sd22_2 227 253 - -
Aip07g00213 927 Pfam Leucine rich repeat 230 288 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine rich repeat 583 641 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine rich repeat 729 781 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine rich repeat 444 502 IPR001611 GO:0005515
Aip07g00213 927 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Aip07g00213 927 Gene3D Ribonuclease Inhibitor 370 852 IPR032675 -
Aip07g00213 927 Gene3D Ribonuclease Inhibitor 153 268 IPR032675 -
Aip07g00213 927 ProSiteProfiles Leucine-rich repeat profile. 348 370 IPR001611 GO:0005515
Aip07g00213 927 SUPERFAMILY L domain-like 125 504 - -
Aip07g00213 927 Gene3D Ribonuclease Inhibitor 1 152 IPR032675 -
Aip07g00213 927 Gene3D Ribonuclease Inhibitor 322 369 IPR032675 -
Aip07g00213 927 Gene3D Ribonuclease Inhibitor 269 321 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00213 Aip-Chr7 1860261 1863044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00213 3 910 Receptor kinase-like Gene Family AT1G47890 35.501 3.81e-127 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00213 - - adu:107496262 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00213 07 1860261 1863044 Aip07g00213 07 1860261 1863044 ECH