Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00211 ATGGGGCATTTCATGTTGTTGGTTGTTAGAGTGGTGTTGTGTGTGTATATGTTTATGATGTTCCATTTTGCATGTTTGTCTTCTCATCTATGCCATTCCCAAGACAGCTCTGCCTTGCTTCACTTTAAGACCCAATTCATTTTTAACCCTTCCTTTTTTGAATATTATGATGCTTGTGACTGGCCTCATGTTTATCCAAAGACGAGTACATGGGAGAATGGGACAGATTGCTGCTCATGGATGGGTGTCACGTGCCACTCTGTGTCTGGTCACGTGATTGGCCTCGATCTCAGTTGTGGTGCACTTGTAGGTAATATGAATCCCAATAGCACTCTTTTTCATCTTACTCATCTCCAAACACTCAACCTTGCTTTCAATTTTTTCAATCATTCTCCATTCTCATCTCAGTTTAGTAGATTTGTGAGTCTCACACACTTGAATTTATCTGATTGTCAATTCAAAGGTGAAATTCCTTCCCAAATCTCACACCTTTCCAAATTACAATCACTTGATCTCTCTTTTAATTATGGTTTGATGTGGAAAGAAACAAGTTGGAAAAGAATGTTGCAAAATGCAACAGCTTTGCGTGAGATTGTATTGGATGAAACAGACATGTCTTCAATTAGCTTAACACCAAAGCCTTTGTCCAATTGGTCTTTCTCTTTCTCTTTGGTTACTCTTAGTCTTGTTGATACTGAAATAAGGGGATACTTGACTAGTCACATTCTCTGTTTACCCAATCTTTATGAGCTCCAGCTATCCAACATTCAAGTCCATGTTCCAAAGTTGAATTGCAGTGCTTCTCTTAGTTTTTTGGATCTTTCATGGTGTCAATCCCTAGGATCACAAATCCCTGATTCCTTTTCTAACCTCACACAGCTAACTTTTTTGGACTTGTCTGAAAATGGATTCAATGGTTCAATCCCATCATTGCTCTCAAACCTTCAGCATCTCACTTACTTGGACCTTTCAGCCAATGCATTCACTGGTTCGTTCCCATCATTTCTTTCAAACCTTCATCATCTTGTTTACTTGGATCTTTCAGAAAATAAGTTTACTGGTCAAATTCCAAATGTGTTTGATAGGCTAACCAATTTGCAATCCCTTGGCCTTTGGGATAATAATTTCCAAAGGAAGTTGCCATCCTCATTATTTGCCTTAACTCAACTCTCTTCCTTGGATTGTTCTCATAATGAAATTGAGGGACCACTACCTGACAAAGTAGCCTTTTTAAATCTCACTCAATTATTCTTAAAAGGCAACTTATTAAATGGCACAATTCCTCAATGGGCCTTATCTCTCAAGTCTTTGAGATACTTAGATCTATCAAATAACAGATTCAGAGGGCACATAAGTGAAATTACATCTTATTCCTTGGACCATTTAGACTTGTGCAACAATGAACTCCAAGGAAACTTTCCTGAATCCATTTTCCATCTTGTCAACCTTACTCATTTGTGCTTGTCTTCAGATAACTGGAGCGGTATTGTCCACTTCCCACTCTTCTCTAAGCTTCAAAACTTGGAGTATCTTTATCTTTCAGGTTGTAATTCATTATTGCTAAAATCTGAAACTAGTGTGAATCACACTTTCTCCAATTTGAAGACACTGCAGTTGCTTTCTAGCAATATTACTGGTTGGTTGGAATTCTCAGGAAAATTTCCAAATTTAGATTTTCTTAAATTGTCCAGCAATAGTCTTCAGGGAAAAGTGCCAGAATGGATACATGGTATGGATTCATTAACTTATTTGAATCTCGCACATAACAATGTTACATTGATGGACCATTTCCCGTGGTATCGACTTGAATACCTTGATCTTAGTTTCAACTCGATGGCTGATGACATTTCTTCCTTCTTTTGTAATGCAACCTCTCTGTACATTGTCAACTTGTCCCACAACAAATTCACAGGAACATTTCCACAGTGCCTTGCCAATAGCTCATCCCTTGCATTTCGAGATTTGGATCTACAAATGAACAAACTTCATGGAACTTTGCCAGATACCTTTTTGGATCTTACTACACTGAATCTCAATGGCAACAATTTGGAAGGTCTATTGCCGAAATCTTTGTCCAAATGCTCAGGACTTGTGGATTTGGATCTCGGTAACAATCAATTTGAGGACACATTTCCCAATTGGCTTCAGAATATATCAAATTTGGAAATACTGGTCTTACGAGGCAATAAGTTGTACGGTCAGATTGCAAATTTGAAATCTGAAAACATATTTCCAAGTTTGATTATTTTTGACATATCATGCAATAACTTTAGCGGCTCATTACCAAAAGCATACATACAAAATTTTCAAGCCATGAAGATTGTTCATGATGTGCAAAGCCCTTTGTTTTATATTGAAACAGGTTGGATAAGTCTTACTTTTAGCGACACAGCAAAAGAATATGTCAATTCTATGATTGCAACAATTAAAAGAGTCAGTCTTACTTTTACGAAAATTCCATATGCCTTTGCAATTATCGATTTGTCAGAAAACAAATTTGAAGGAGAGATTCCAGATGATTTTGGGGAGCTTCATGGACTCATAGGCCTCAATCTTTCTCATAACAGACTTGTTGGTCATATTCCCCACTCTTTGGGAAATTTGACAAATCTTCAATCATTGGATCTCTCCTCAAATATGCTTTCTGGGGATATTCCTACTGAATTGGTAAATCTGAACTTTCTTGAAGTCTTGAGTCTTTCCCAAAACCAGTTGGTGGGACCAATACCCAGAGGAAAACAATTTGATACATTTTCAAATGATTCCTATGAGGGAAACATGGGGTTATGTGGATTTCCATTGTCAATTCAATGCAACAACAATGTCCCTTTGCAACAATATCCATCTTCTGAGGCTGAAGACAAATTTGAATTTGGTTGGAAACCAGTGGCAATAGGATATGCATGTGGAATGGTACTTGGAATAGGATTGGGATATTGTGTTTTCTCAATTGGAAAGCCTCAATGGCTAGTGGTCCTCTTTGGAGGTAAAAGAACCAAAAGGAGGAGCCGTCGAAACCGCCAGCGTGCAAGAACAACTCTGTTTCAGCTTTTTGTTGCAATGTAA 3066 0.3777 MGHFMLLVVRVVLCVYMFMMFHFACLSSHLCHSQDSSALLHFKTQFIFNPSFFEYYDACDWPHVYPKTSTWENGTDCCSWMGVTCHSVSGHVIGLDLSCGALVGNMNPNSTLFHLTHLQTLNLAFNFFNHSPFSSQFSRFVSLTHLNLSDCQFKGEIPSQISHLSKLQSLDLSFNYGLMWKETSWKRMLQNATALREIVLDETDMSSISLTPKPLSNWSFSFSLVTLSLVDTEIRGYLTSHILCLPNLYELQLSNIQVHVPKLNCSASLSFLDLSWCQSLGSQIPDSFSNLTQLTFLDLSENGFNGSIPSLLSNLQHLTYLDLSANAFTGSFPSFLSNLHHLVYLDLSENKFTGQIPNVFDRLTNLQSLGLWDNNFQRKLPSSLFALTQLSSLDCSHNEIEGPLPDKVAFLNLTQLFLKGNLLNGTIPQWALSLKSLRYLDLSNNRFRGHISEITSYSLDHLDLCNNELQGNFPESIFHLVNLTHLCLSSDNWSGIVHFPLFSKLQNLEYLYLSGCNSLLLKSETSVNHTFSNLKTLQLLSSNITGWLEFSGKFPNLDFLKLSSNSLQGKVPEWIHGMDSLTYLNLAHNNVTLMDHFPWYRLEYLDLSFNSMADDISSFFCNATSLYIVNLSHNKFTGTFPQCLANSSSLAFRDLDLQMNKLHGTLPDTFLDLTTLNLNGNNLEGLLPKSLSKCSGLVDLDLGNNQFEDTFPNWLQNISNLEILVLRGNKLYGQIANLKSENIFPSLIIFDISCNNFSGSLPKAYIQNFQAMKIVHDVQSPLFYIETGWISLTFSDTAKEYVNSMIATIKRVSLTFTKIPYAFAIIDLSENKFEGEIPDDFGELHGLIGLNLSHNRLVGHIPHSLGNLTNLQSLDLSSNMLSGDIPTELVNLNFLEVLSLSQNQLVGPIPRGKQFDTFSNDSYEGNMGLCGFPLSIQCNNNVPLQQYPSSEAEDKFEFGWKPVAIGYACGMVLGIGLGYCVFSIGKPQWLVVLFGGKRTKRRSRRNRQRARTTLFQLFVAM 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00211 1021 PRINTS Leucine-rich repeat signature 342 355 - -
Aip07g00211 1021 PRINTS Leucine-rich repeat signature 868 881 - -
Aip07g00211 1021 SMART LRR_sd22_2 315 341 - -
Aip07g00211 1021 SMART LRR_sd22_2 868 894 - -
Aip07g00211 1021 SMART LRR_sd22_2 434 456 - -
Aip07g00211 1021 SMART LRR_sd22_2 505 536 - -
Aip07g00211 1021 SMART LRR_sd22_2 718 740 - -
Aip07g00211 1021 Gene3D Ribonuclease Inhibitor 337 412 IPR032675 -
Aip07g00211 1021 Gene3D Ribonuclease Inhibitor 458 944 IPR032675 -
Aip07g00211 1021 ProSiteProfiles Leucine-rich repeat profile. 436 458 IPR001611 GO:0005515
Aip07g00211 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 20 423 - -
Aip07g00211 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 412 971 - -
Aip07g00211 1021 Gene3D Ribonuclease Inhibitor 413 457 IPR032675 -
Aip07g00211 1021 Gene3D Ribonuclease Inhibitor 264 336 IPR032675 -
Aip07g00211 1021 SUPERFAMILY RNI-like 419 785 - -
Aip07g00211 1021 SUPERFAMILY L domain-like 265 517 - -
Aip07g00211 1021 Gene3D Ribonuclease Inhibitor 29 263 IPR032675 -
Aip07g00211 1021 ProSiteProfiles Leucine-rich repeat profile. 870 893 IPR001611 GO:0005515
Aip07g00211 1021 SMART LRR_typ_2 363 387 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 115 135 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 339 362 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 315 338 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 291 314 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 140 164 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 670 693 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 868 892 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 844 867 IPR003591 -
Aip07g00211 1021 SMART LRR_typ_2 434 461 IPR003591 -
Aip07g00211 1021 SUPERFAMILY L domain-like 824 937 - -
Aip07g00211 1021 Pfam Leucine rich repeat N-terminal domain 33 85 IPR013210 -
Aip07g00211 1021 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Aip07g00211 1021 Pfam Leucine rich repeat 673 731 IPR001611 GO:0005515
Aip07g00211 1021 Pfam Leucine rich repeat 317 375 IPR001611 GO:0005515
Aip07g00211 1021 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Aip07g00211 1021 SUPERFAMILY RNI-like 86 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00211 Aip-Chr7 1823381 1826627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00211 11 1002 Receptor kinase-like Gene Family AT2G15080 34.104 1.68e-134 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00211 - - adu:107496262 1724.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00211 07 1823381 1826627 Aip07g00211 07 1823381 1826627 ECH