Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00207 ATGTTAATGTTATTCCACTTTGTCTGTTTGTCTTCGCATTCATGCCATCCTGAGGAGAACTCTGCATTGCTTCACTTCAAGACTCAACTCATTACTAACACTACCTCTTATGAAGATTATTATTATTATGAAAACTGTCGTCATGTTTATCCAAAGATGAGGACGTGGGAAAATGGAACAGATTGTTGCACCTGGATGGGTGTCACGTGCCACCCTGTGTCTGGTCACGTGATTGGCCTTGATCTTGCTTGTAGTGCGCTTCAAGGTATAATCCATCCTAACAACACCCTTTTTCATCTTACTCATCTCCAAACACTCAGCTTTGCTTTCAATGATTTTTATGGTTCTGAATTGTCATCTCAGTTTAGTAAGCTTGTAAGTCTCACACACTTGAACTTATCTGGTTGCGGGTTTGAAGGTGAAATTCCTTCCCAAATCTCACACCTTTCCAAATTACAATCACTTGACCTCTCTTTTAATTATGGTTTGATGTGGAAAGAAACTACTTGGAAGAGGTTGCTGCAAAACACATCGTGTTTAAGAGAGATTGTATTGGATGACACAAATATGTCTTCAATTGGTCCAACACCAAATCCTTTGTCTTTGATTGCCAACTTGTCTTCCACTTTGGTTACTCTTAGTCTTGTTTATACTGAAATAAGGGGTTCTTTGATAAATGACATACTTTGTTTACCCAATCTTCAACACCTCATTCTAACACAGAATTATGAATTGTCAGTCCATCTTTCCGAGTTGAGTTGTACCACTTCTCTTAGTATCTTGGATCTTTCATATTGTGATATCCAAGGGCCTATCTCTTCACCATTCTCTAATCTAACACGCCTCACTTCCTTGAATTTGGCGGAAAATCATCTCAACGGTTCAATCCCGTCATCACTTTTAAACCTTCAGCGTCTCACTGACTTGGATCTTTCATGGAATAAGCTTAGTGGTCAAATTCCAAATGTGTTTGATAGGCTAACCAACTTGCAAACTCTCTCTCTTCATGATAATAATTTTCAAGGGATGTTGCCATCTTCATTGTTTACCTTAACTCGACTCTCTCAATTGGATTGTTCTTATAACCAAATTGAGGGGCCACTGCCCAATGAAGTAGCCTTTTCAAATCTTACCCAATTAATCCTAAATAACAACCTGTTAAATGGGACAATTCCTTGGTGGCCTTTATCCTTCAAGTCTTTGAGATATTTGGATTTATCAAATAACCAATTTACAGGGCACATAAACAGTCAAATCAAATCTTATTCCTTGGAATATCTCTACTTGTGTGACAATAAGCTTCAAGGAAACTTTTCAGAATCAATTTATGATCTTGTGAACCTTACTGGATTGTGTTTGTCCTCAAACAATTGGAGCAGTACTGTCAACTTTTCACTCTTTTCTAAGCTCCAAAAATTGGAGTATCTTTCTCTTTCAGGTTGCAATTCATTATTGCTAGAATCTGAAACAAGTATTAGTTACACTTTTTTCAATTTGTATGTACTACAGTTACTTTCTAACAATATCATTGGTTGGTCAAAGTTCTCAGGAAAATTTCCACAATTGGAATATCTTGAATTGTCCAATAATAAACTTGAAGGAAAGGTACCCAAATGGATACATGATATACCCTCATTATTTCATTTGAAACTCTCACACAACATGTTCACGTCAATAGGTCATCAATTCCCATGGTATCAATTTGATTACCTTGATCTTAGCTTCAACTTGATGGATGATGACATTTCTTCCTTCTTTTGTAATGCAACCTCTTTGAAAGTTATCAACTTGTCCCACAACAGATTCACAGGAACATTTCCACAGTGTCTTGCCAATACCTCATCCCTTGTAGATTTGGATATACAAATGAACAAACTTCATGGCAATTTATCAGATACTTTTAAGCATCGTGGACTTGACACACTGAATCTCAATGGCAACCAGTTCAAAGGTTTATTGCCAAAATCTTTGTCCAATTGCACATATCTTGTGGATTTAGATCTCGGTGATAATCAATTTGAAGATACGTTTCCCCATTGGCTCCAAAATCTATCAAGGTTGGAAATACTGGTGTTACGAGGCAATAAGTTGTACGGTCCCATTGCCAATTTGAAATCTGAAAATATATTTCCAAGTTTGATTATTTTTGACATATCACGCAATAACTTTAGTGGCTCGTTACCAAAAGCATACATACAAAATTTTCAAGCCATGAAGATTGTGGATGATGAAGTGCGAAGCAGGTTGGTAGATTATATTGACACTAGTGCTGGCAGTGGAGTGCGCAACATTCGTCCAGAATATGATAATTCTGTAATTGCAACAATTAAAGGAGCCAATACTCCTTTTGCGAAAATTCCAAGAGCCTTTGTAAATATAGATATGTCAGAAAACAAATTTGAAGGAGACATTCCAGATGTTATTGGAGAGCTTCAAGCACTTAAAGATCTCAACCTTTCACATAACAGACTCGTTGGTCATATCCCCTATTCTTTGGGAAATTTGACAAATCTGGAATCGTTGGATCTCTCATCAAATATGCTTACTGGGAATATTCCTACTGAATTGACAAATATGAACTTTCTTGAAGTCTTGAATCTTTCCCAAAACCAGTTGGTGGGACCAATACCCAAAGGAAAACAGTTTGATACATTTTTAAATGATTCCTATGGGGGAAACATGGAGCTATGTGGATTGCCATTGTCAATACAATGCAACAACAATGTCCCTTTGCAACAATATCCATCTTCTGAGGCTGAGGACAAATTTGGGTTTGGTTGGAAAGCAGTGGCAATAGGATATGCATGTGGAATGGTGCTTGGAATTGGCTTGGGATTCTGTGTTTTCTCAATTGGAAAGCCTCAATGGCTTGTGATCATCTTTGGAGGCAAAAGAATCAAAAGAAGGAACCGTGGAAATCGGCGTGCAAGAACAACTTAA 2940 0.3731 MLMLFHFVCLSSHSCHPEENSALLHFKTQLITNTTSYEDYYYYENCRHVYPKMRTWENGTDCCTWMGVTCHPVSGHVIGLDLACSALQGIIHPNNTLFHLTHLQTLSFAFNDFYGSELSSQFSKLVSLTHLNLSGCGFEGEIPSQISHLSKLQSLDLSFNYGLMWKETTWKRLLQNTSCLREIVLDDTNMSSIGPTPNPLSLIANLSSTLVTLSLVYTEIRGSLINDILCLPNLQHLILTQNYELSVHLSELSCTTSLSILDLSYCDIQGPISSPFSNLTRLTSLNLAENHLNGSIPSSLLNLQRLTDLDLSWNKLSGQIPNVFDRLTNLQTLSLHDNNFQGMLPSSLFTLTRLSQLDCSYNQIEGPLPNEVAFSNLTQLILNNNLLNGTIPWWPLSFKSLRYLDLSNNQFTGHINSQIKSYSLEYLYLCDNKLQGNFSESIYDLVNLTGLCLSSNNWSSTVNFSLFSKLQKLEYLSLSGCNSLLLESETSISYTFFNLYVLQLLSNNIIGWSKFSGKFPQLEYLELSNNKLEGKVPKWIHDIPSLFHLKLSHNMFTSIGHQFPWYQFDYLDLSFNLMDDDISSFFCNATSLKVINLSHNRFTGTFPQCLANTSSLVDLDIQMNKLHGNLSDTFKHRGLDTLNLNGNQFKGLLPKSLSNCTYLVDLDLGDNQFEDTFPHWLQNLSRLEILVLRGNKLYGPIANLKSENIFPSLIIFDISRNNFSGSLPKAYIQNFQAMKIVDDEVRSRLVDYIDTSAGSGVRNIRPEYDNSVIATIKGANTPFAKIPRAFVNIDMSENKFEGDIPDVIGELQALKDLNLSHNRLVGHIPYSLGNLTNLESLDLSSNMLTGNIPTELTNMNFLEVLNLSQNQLVGPIPKGKQFDTFLNDSYGGNMELCGLPLSIQCNNNVPLQQYPSSEAEDKFGFGWKAVAIGYACGMVLGIGLGFCVFSIGKPQWLVIIFGGKRIKRRNRGNRRARTT 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00207 979 Pfam Leucine rich repeat N-terminal domain 18 70 IPR013210 -
Aip07g00207 979 Gene3D Ribonuclease Inhibitor 424 911 IPR032675 -
Aip07g00207 979 PRINTS Leucine-rich repeat signature 306 319 - -
Aip07g00207 979 PRINTS Leucine-rich repeat signature 835 848 - -
Aip07g00207 979 SUPERFAMILY L domain-like 791 904 - -
Aip07g00207 979 Gene3D Ribonuclease Inhibitor 323 423 IPR032675 -
Aip07g00207 979 Gene3D Ribonuclease Inhibitor 206 322 IPR032675 -
Aip07g00207 979 SUPERFAMILY RNI-like 80 415 - -
Aip07g00207 979 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 374 938 - -
Aip07g00207 979 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 8 387 - -
Aip07g00207 979 Pfam Leucine rich repeat 813 872 IPR001611 GO:0005515
Aip07g00207 979 Pfam Leucine rich repeat 570 626 IPR001611 GO:0005515
Aip07g00207 979 Pfam Leucine rich repeat 498 555 IPR001611 GO:0005515
Aip07g00207 979 Pfam Leucine rich repeat 257 316 IPR001611 GO:0005515
Aip07g00207 979 Pfam Leucine rich repeat 637 697 IPR001611 GO:0005515
Aip07g00207 979 SMART LRR_sd22_2 100 120 - -
Aip07g00207 979 SMART LRR_sd22_2 445 466 - -
Aip07g00207 979 SMART LRR_sd22_2 351 379 - -
Aip07g00207 979 SMART LRR_sd22_2 684 711 - -
Aip07g00207 979 SMART LRR_sd22_2 835 861 - -
Aip07g00207 979 SMART LRR_sd22_2 519 545 - -
Aip07g00207 979 SMART LRR_sd22_2 303 332 - -
Aip07g00207 979 Gene3D Ribonuclease Inhibitor 16 205 IPR032675 -
Aip07g00207 979 SUPERFAMILY RNI-like 391 743 - -
Aip07g00207 979 Pfam Leucine Rich Repeat 400 418 IPR001611 GO:0005515
Aip07g00207 979 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
Aip07g00207 979 SMART LRR_typ_2 100 124 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 543 566 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 125 149 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 279 302 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 835 859 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 398 426 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 811 834 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 684 712 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 327 351 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 637 659 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 519 542 IPR003591 -
Aip07g00207 979 SMART LRR_typ_2 303 326 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00207 Aip-Chr7 1780832 1783771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00207 52 979 Receptor kinase-like Gene Family AT3G11010 34.643 1.72e-135 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00207 - - adu:107496262 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00207 07 1780832 1783771 Aip07g00207 07 1780832 1783771 ECH