Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00206 ATGAGGACGTGGGAGAATGGGACAGATTGTTGTTCATGGATGGGTGTCACGTGTGATTCTCTGTCTGGTCACGTGATTGGCCTCGATCTAAGTTGCAGTGCACTTGTAGGTATAATCCATCCTAACAGTACACTTTTCCATCTTACTCGTCTTCAAACACTCAATTTTGCTTACAATTATTTCTATAATTCTCAGTTGTCATCTCAGTTTGGTGAGTTTGTGAGTCTCACACACTTGAATTTATCTAGTTGTGGGTTTGAAGGTGATATTCCTTCTCAAATCTCACACCTTTCCAAATTACAGTCACTTGATCTCTCTTTGAATTATGGTTTAAAGTGGGAAGAAACAACTTGGAAGAGGTTGCTGCAAAACACATCTTTAAGAGAGATTGTATTGGATCAAACAGATATGAGTTTAATTGGTCCAACACCAAATCCTTTGTCTTTGATCGCCAACTTGTCTTCCACTTTGGTTACTCTCAGTCTTGGTTATACTAGAATAAGAGGTTCTTTGACAAGTGACATATTCTGTTTACCCAATCTTCAACACCTCATTCTAACAGGGAATGAATTGTCAGTCCATCTTTCCGAGTTGAGTTGTACCACTTCTCTTAGTATCTTGGATCTTTCAGATTGTGGGATCCAAGGGCCTATCTCTTCATCATTCTATAATCTAACACACCTCACTTCCTTGAATTTGGCGGATAATCAACTCAACGGTTCAATCTCGTCATCACTTTTAAACCTTCAGCGTCTCACTCACCttgatctttcaaggaatgagcttagtggtcaaattccaaatgTGTTTGATAAGCTAACCAAGTTGCAAACTCTCTCTCTTAGTGATAATAATTTCCAAGGAAAGTTGCCATCTTCATTGTTTACATTAACTCAACTCTCTCAATTAGATTGTTCTTCTAATCAAATTGAAGGGCCACTACCCAAACAAGTAGCCTTTTCAAATCTCATTGAATTATTCCTAGAAGACAACTTATTAAATGGGACAATTCCGCCATCAATTTTATCCCTCAAGTCTTTGAGATCTTTGGATTTATCAAATAATCGATTCATAGGGTATATAAGCAGTGAAATCACATCTTATTCCTTAGAATATCTATTCCTGTGTGGCAATAAGCTTCAAGAAAACATTCTAGAATCAATTTCTCATTTTGTAAATCTTACATATTTGTGCTTGTCCTCAGACAATTGGAGTGGTACTGTTCACTTTCAACTCTTTTCTAAGCTCCAAAAATTGGAGTATCTTTCTCTTTCAGGTTGCAATTCATTATTGCTAGAATCTGAAACAAGTATGAATTACACTTTTTTGAATTTGTATGCACTACAGTTATTTTCTAACAATATCATTGGTTGGTCAAAGTTCTCAGGAAAATTTCCACAATTGGAATTTCTTGAATTGTCCAATAATAAACTTGAAGGAAAGATACCCAATTGGATACATGATATACCCTCATTATGTCATTTGAAACTCTCACACAACATGATCACATCAATAGGTCATCAATTCCCATGGTATCACTTTGAATACCTTGATCTTAGCTTCAATTTGATGGATGATGACATTTCTTCCTTCTTTTGTAATACAACCTCTTTGGAAGTTATCAACTTGTCCCACAACAGATTCACAGGAACATTTCCACAGTGTCTTGCCAATACCTCATCCCTTGTAGATTTGGATATACAGATGAACAAACTTCATGGCAATTTATCAGATAATTTTAAGCAACTTCAACTTGAAACACTGAATCTCAATGGCAACCAGTTTGAAGGTTTATTGCCGAAATCTTTGTCCAGTTGCACATATCTTGTGGATTTAGATCTCGGTAATAATCAATTTGAGGATACATTTCCTGATTGGCTCCAAAATCTATCAAGTTTGGAAATACTGGTCTTAGGAGGCAATAAGTTGTATGGTCCCATTGCCAATTTGAAATCTGAAAATATATTTCCAAGTTTGATTTATCTTGACATATCATGTAATAACTTTAGCGGCTCATTACCAAAAGCATACATACAAAATTTTCAAGCCATGAAAATTGTGGGTGATGAAGTGCAACGCAGGTTGGTAGATTATATTGACACTAGTTTTGGAGCTATAGTGGGCAACATTCTTCCAGAATATGATAATTCCGTAATTGCAACAGTGAAAGGAACCAATACCCCTTTTGCCAAAATTCCAACAACCTTTGTAAATATAGATTTGTCAGAGAACAAATTTGAAGGAGAGATTCCAGATGATTTTGGGGAGCTTCATGGACTCATAGGCCTCAACCTTTCTCATAACAGACTTGTTGGTCATATTCCCCACTCTTTGGGAAATTTGACAAATCTAGAATCATTGGATCTCTCCTCAAATATGCTTACTGGGGATATTCCTACTGAATTGGCAAATCTGAACTTTCTTGAAGTCTTGAGTCTTTCCCAAAACCAGTTGGTGGGACCAATACCCAGAGGAAAACAGTTTGATACATTTTCAAACGATTCCTATGAGGGAAACATGGGGTTGTGTGGATTTCCATTGTCAATTCAATGCAATAATGTCTCTTTGCAACAATGTCCATCTTCTGAGGCTGAAGACAAATTTGGATTTGGATGGAAACCAGTGGCAATAGGATATGCATGTGGAGTGGTGCTTGGAATTGGCTTGGGATTTTGTGTTTTCTCAATTGGAAAGCCTCAATGGCTTGTGATCATCTTTGGAGGCAAAAGAATCAAAAGAAGGAGCCGTGGAAATCGGCGTGCAAGAACAACTTAA 2775 0.3636 MRTWENGTDCCSWMGVTCDSLSGHVIGLDLSCSALVGIIHPNSTLFHLTRLQTLNFAYNYFYNSQLSSQFGEFVSLTHLNLSSCGFEGDIPSQISHLSKLQSLDLSLNYGLKWEETTWKRLLQNTSLREIVLDQTDMSLIGPTPNPLSLIANLSSTLVTLSLGYTRIRGSLTSDIFCLPNLQHLILTGNELSVHLSELSCTTSLSILDLSDCGIQGPISSSFYNLTHLTSLNLADNQLNGSISSSLLNLQRLTHLDLSRNELSGQIPNVFDKLTKLQTLSLSDNNFQGKLPSSLFTLTQLSQLDCSSNQIEGPLPKQVAFSNLIELFLEDNLLNGTIPPSILSLKSLRSLDLSNNRFIGYISSEITSYSLEYLFLCGNKLQENILESISHFVNLTYLCLSSDNWSGTVHFQLFSKLQKLEYLSLSGCNSLLLESETSMNYTFLNLYALQLFSNNIIGWSKFSGKFPQLEFLELSNNKLEGKIPNWIHDIPSLCHLKLSHNMITSIGHQFPWYHFEYLDLSFNLMDDDISSFFCNTTSLEVINLSHNRFTGTFPQCLANTSSLVDLDIQMNKLHGNLSDNFKQLQLETLNLNGNQFEGLLPKSLSSCTYLVDLDLGNNQFEDTFPDWLQNLSSLEILVLGGNKLYGPIANLKSENIFPSLIYLDISCNNFSGSLPKAYIQNFQAMKIVGDEVQRRLVDYIDTSFGAIVGNILPEYDNSVIATVKGTNTPFAKIPTTFVNIDLSENKFEGEIPDDFGELHGLIGLNLSHNRLVGHIPHSLGNLTNLESLDLSSNMLTGDIPTELANLNFLEVLSLSQNQLVGPIPRGKQFDTFSNDSYEGNMGLCGFPLSIQCNNVSLQQCPSSEAEDKFGFGWKPVAIGYACGVVLGIGLGFCVFSIGKPQWLVIIFGGKRIKRRSRGNRRARTT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00206 924 Pfam Leucine rich repeat N-terminal domain 2 19 IPR013210 -
Aip07g00206 924 SMART LRR_typ_2 757 780 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 249 272 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 225 248 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 273 297 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 584 605 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 630 658 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 489 512 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 344 372 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 178 202 IPR003591 -
Aip07g00206 924 SMART LRR_typ_2 781 805 IPR003591 -
Aip07g00206 924 Gene3D Ribonuclease Inhibitor 269 410 IPR032675 -
Aip07g00206 924 ProSiteProfiles Leucine-rich repeat profile. 783 806 IPR001611 GO:0005515
Aip07g00206 924 ProSiteProfiles Leucine-rich repeat profile. 491 512 IPR001611 GO:0005515
Aip07g00206 924 SUPERFAMILY L domain-like 734 849 - -
Aip07g00206 924 SUPERFAMILY RNI-like 335 687 - -
Aip07g00206 924 Pfam Leucine Rich repeats (2 copies) 782 822 IPR025875 -
Aip07g00206 924 SMART LRR_sd22_2 367 390 - -
Aip07g00206 924 SMART LRR_sd22_2 273 305 - -
Aip07g00206 924 SMART LRR_sd22_2 225 251 - -
Aip07g00206 924 SMART LRR_sd22_2 178 200 - -
Aip07g00206 924 SMART LRR_sd22_2 630 657 - -
Aip07g00206 924 SMART LRR_sd22_2 781 807 - -
Aip07g00206 924 SMART LRR_sd22_2 344 363 - -
Aip07g00206 924 PRINTS Leucine-rich repeat signature 252 265 - -
Aip07g00206 924 PRINTS Leucine-rich repeat signature 781 794 - -
Aip07g00206 924 Gene3D Ribonuclease Inhibitor 411 854 IPR032675 -
Aip07g00206 924 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 320 883 - -
Aip07g00206 924 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 3 332 - -
Aip07g00206 924 SUPERFAMILY RNI-like 28 359 - -
Aip07g00206 924 Gene3D Ribonuclease Inhibitor 149 268 IPR032675 -
Aip07g00206 924 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Aip07g00206 924 Pfam Leucine Rich Repeat 346 363 IPR001611 GO:0005515
Aip07g00206 924 Pfam Leucine Rich Repeat 75 97 IPR001611 GO:0005515
Aip07g00206 924 Pfam Leucine rich repeat 444 502 IPR001611 GO:0005515
Aip07g00206 924 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Aip07g00206 924 Pfam Leucine rich repeat 515 572 IPR001611 GO:0005515
Aip07g00206 924 Pfam Leucine rich repeat 584 643 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00206 Aip-Chr7 1763266 1766040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00206 2 924 Receptor kinase-like Gene Family AT3G11010 34.579 1.52e-132 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00206 - - adu:107496262 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00206 07 1763266 1766040 Aip07g00206 07 1763266 1766040 ECH