Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00178 ATGGAGGGAAAGTGGATGAGTTCCCAATCACAGTCACCGAACTTCCACTTACTCGCCAAGATCAAAGAGTTCACTCTATCTATCGTCACTGACCTGAGCAACGGTCAATCGCCGGTAATCCTCATCCACCGGTTCAGGAATCACTGCACTAATCCCAATTCCAATTGCTTTTGTGGCTCCAATCTACCATGCGGGAAGGATGTTCTCACTCTCTGCAGGGAATCGCACGTACACAGAATAGATGTGATGTTGAGAGTGCTACTCATTGTTCAGAAACTTTTGCAAGAGAACAGGCATTGTTCCAAGAGGGATATTTATTACATGCATCCTTCTGTGTTTTCAGATCAGTCAGTTGTAGACCATGCAATTAATGATATATGTGTCCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTAAACTTTTTGTTAGTTATGGGATGGATAAGATTCTTTGAAGGAAAAAGGCTGTTTGACTGCATCAGTTCTCCGAACAAGGTCCACCCTATTCCTGTTCATGTTGAAGAAGTTAAAGATATCATTAGTGTTGCTCACTACATATTAGTCGTTGAGAAAGAATCAGTTTTCGAAAGACTAGCAAATGACCAGTTCTGCAGTGCAAACCACTGCATTGTGATCACTGGAAGAGGCTACCCGGATATTCCTACAAGAAGGTTTCTGCGTCTTCTAGTTGAGGATTTGCACCTGCCTGCATATTGCTTGGTTGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCCATGCAAATGGCTTATGACACAAAACATCTTCGTGTCCCGGAGATACAATGGCTTGGAGCTTATCCTTCAGATGCTGAGAGATATTTTATTCCAAAGCAGTGTCTACTTTCTCTAACTGCTGAAGACAAGAGGAAACTTGAAGCCATGTTGCTTAGATGCTACCTGCAAAGGGATGTGCCACAATGGAGGTTGGAGCTAAAGATGATGCTGGAGAAAGGAGTGAAGTTTGAGATTGAAGCATTATCTGTGCATGCTCTTTCATTCTTGTCAGTGTCTTACCTGCCATCTAAAATTCAAGGTAAAATGATCATTTAG 1092 0.4222 MEGKWMSSQSQSPNFHLLAKIKEFTLSIVTDLSNGQSPVILIHRFRNHCTNPNSNCFCGSNLPCGKDVLTLCRESHVHRIDVMLRVLLIVQKLLQENRHCSKRDIYYMHPSVFSDQSVVDHAINDICVLMQCSRHNLNVVNFLLVMGWIRFFEGKRLFDCISSPNKVHPIPVHVEEVKDIISVAHYILVVEKESVFERLANDQFCSANHCIVITGRGYPDIPTRRFLRLLVEDLHLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAYPSDAERYFIPKQCLLSLTAEDKRKLEAMLLRCYLQRDVPQWRLELKMMLEKGVKFEIEALSVHALSFLSVSYLPSKIQGKMII 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00178 363 Gene3D - 3 141 IPR036388 -
Aip07g00178 363 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 10 360 - -
Aip07g00178 363 PRINTS SPO11 homologue signature 108 128 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aip07g00178 363 PRINTS SPO11 homologue signature 344 363 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aip07g00178 363 PRINTS SPO11 homologue signature 248 267 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aip07g00178 363 PRINTS SPO11 homologue signature 283 307 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aip07g00178 363 PRINTS SPO11 homologue signature 201 216 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aip07g00178 363 SUPERFAMILY DNA topoisomerase IV, alpha subunit 77 359 IPR036078 GO:0003677|GO:0005694
Aip07g00178 363 Pfam Type IIB DNA topoisomerase 79 139 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Aip07g00178 363 Gene3D - 144 363 - -
Aip07g00178 363 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 10 360 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aip07g00178 363 CDD TOPRIM_TopoIIB_SPO 185 347 IPR034136 -
Aip07g00178 363 PRINTS DNA topoisomerase VI subunit A family signature 116 133 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aip07g00178 363 PRINTS DNA topoisomerase VI subunit A family signature 102 113 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aip07g00178 363 PRINTS DNA topoisomerase VI subunit A family signature 211 232 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aip07g00178 363 PRINTS DNA topoisomerase VI subunit A family signature 187 204 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aip07g00178 363 PRINTS DNA topoisomerase VI subunit A family signature 243 259 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00178 Aip-Chr7 1383447 1386793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00178 K10878 - gmx:100813920 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00178 07 1383447 1386793 Aip07g00178 07 1383447 1386793 ECH