Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00148 atgaatgaggagctaatggcAAAAATTAAAGATGAGGAAATAAGGGAGGCTGTTTTCAGTATGGGAGGGCTGAAAGCTCCAGGGCCAGATGGTTTAAATGGGCTTTTCTTCCAACAACACTGGGAGATCTTAAGCAAAGAAGTCTGTGGAGTAGTGAAGCAAATTTTTGAAGAAGGATGTATACCAGGGGATTTAGGGGAAACTACTGTTGTTTTGGTGCCCAAGGTTAGCCAACCTGAAAGCCTAAATCAGCTCAGACCAATAAGTTGCTGCAATTTTGCATATAAAATAGTAACTAAGGTCCTGGTGGGAAGGCTAAGGAAAGTGTTAGATCAAATCATATCTCCAGTTCAGAGTGCATTTGTCAAAGGAAGACTCATACAAGACAATATAATTATAGTGCAAGAAGCTTTTCATATGCTAAATAAAAAAGGAAACGCTGGAAGTCAGGACCTAGCGATAAAATTGGACATGAATAAAGCCTATGATAGATTGGAGTGGAATTTTATGCAAAGGGTCATGGAAGAACTTGGATTTAGTAATGAATGGGTGAGGCTGGTTATGAGCTGTGTTAAAAGCGTCACTTACAGATTTAAAATAAATGGGAAGCTATCCAGTAGAATTACCCCACAAAGAGGACTTAGGCAGGGAGACCCATTATCACCATACCTCTTCATTTTGGCAGCTGAAAGCTTCACTATTCTGATGGAAAAGGCGAGAAGGGATAGGCTGATTTCTGGAATAAGATTAGCTCAATCTGCACCGGTCATCACTCATTTGTTATTTGCTGACGATTGCATAATTTTTGCAGGTGCGGAAGAGGAGGAGATATTTCAACTAATCCAGATTTTAAACAAATACACGGAGGCATCAGGACAAAGAATCAACATTGAAAAATCCGGGCTAATCTTTGGAAGCCAAGTTGGGCATTCGTCCCCTACCAATCAGCAAAGAATACATAAAGAACGGGACATACCTCTGAGGGGAGGAATGGATACACGAGACATGCATCAAGCTGAACGGGCAGAGAAGCACCAACCCAATGCGGCGCAGGGGCGAACCATGGAGAGGAGCAACCACAGTGGCAGAGTTGAGGGAGCAGATCGACGAAGGAGTGCAGATGGCTATGATCCATGGCGGAAAGGTTCAAGGCAGAGGATTGTTGAGGCCGAGACAACCCACCCAGAAGACCCACCGCGGCATAAGAAGAAAAGAAAGAACAAGAGAACCACTCCCTCCACTGCCTCAACCTCTTCTTTAGGAATCAATTTGAAGCGAGGAACTTCCCAGCTTAGTGTCCAATGGTTGACCAAGACCAACGCCTCTGTTGTCGAATCTGTTTTTCTTGATTCCAGATTCATTCCCTGGTCAGCACCAACCCACACCTCTCTTGAATCTCTTTCAAATTGGAGAACAATTAAGCTAAGGACAACAATGGCTGAGGTTGTCCATAATGGGCTTCAAGTAGAGAAGCATCAATCCAAGGTTTCTTCTGTAGATGGTGACATAATTAATGAGGTTAATGACACTCCCATTGAACAAGTGAAGTTAACAGTGCCAATCAATGATGATCCAAATCAACCATCACTAACATTCAGAACATGGGTTCTTGGAACCATGTCATGTGTTGTTCTTTCGTTTGTGAATCAATTTTTCAGCTACAGAACCAACCCCCTTTTTGTTTCATCTATGTCTGCTCAAATTGTTGCATTCCCACTTGGCAAATTCATGGCTGCAACACTTCCCAAAAAGCCTATTCAAATTCCCATGACAAAATTGCATTTCACATTGAATCCAGGCCCATTCACTTTGAAAGAACATACCCTTATTACAATCTTTGCTAGTGCTGGATCTAGTGGTGTTTATGCAATTGGCATAATCACCATTGTCAAGGCTTTCTACCATAGAGGCATTCATCCATTGGCTGCTCTTATGGCATTCCATGAGAAAGAGAAAAGGCCAAAAGAAGGATTAACAAGGCTACAATTCTTCTTGATGGTATTTGGAACAAGCTTTGCTTATTATCTAATTCCAGGTTACTTATTCCAAGCAATATCAAGTGTTTCTATAGTATGCTTAATATTTAAGGACTCCATTTTAGCACATCAAATAGGATCAGGCATGAAAGGACTTGGAATTGGTTCATTTGGGATTGATTGGAACACAGTTGCTGGATTCCTAGGTAGTCCTCTGGCTGTCCCTGCCTTTGCAATCACAAACATGTTGGTTGGATTTGTTTTCTTCATCTATGTTGTTCTTCCTCTTGCTTATTGGAACAATGTTTTTGATGCTAAGAGGTTCCCTCTTATTAGCTCTCACACGTTTGACTTTTCTGGTCAAAGATACAATGTCACAAGGATTCTGAATGTTAAGACTTTTGACATTGACTTGGAGAGTTATCAGAATTATAGTAAGCTCTATGTTAGTGCTGTCTTTGCACTTCTCTATGGATTGAGCTTTGCTAGTTTGACTGCCACTATTTCACATGTCATTCTTTTCAATGGAAAAACAATATATCAGATGTGGAGGAAGACAACAAAAACACTGAAAGGAGAAGAAGTTGAAGATGTGCATACAAGAATAATGAAGAAGAACTATGAACAAGTTCCTCAATGGTGGTTTGTCTCCATTTTAGTTCTAATGGCCGTCATGGCCTTAATAACTTGTGAAGGTTTTGGCAAGCAACTCCAACTTCCATGGTGGGGAGTTTTAATGTCTCTAGGAATTGCATTAGTCTTCACTCTGCCAATTGGAGTCATTCAAGCAACAACAAACACACAAATTGGACTGAATGTGATCACAGAATTAATAATTGGATATATTTACCCGGGAAAGCCTCTTGCAAATGTAACCTTCAAGACATATGGATACATTAGCATGTCACAGGCACTTGCTTTTCTTGGTGACTTCAAGTTAGGTCACTACATGAAGATTCCTCCAAAATCTATGTTCATCGTTCAGTTGGCAAGCACAATAGTGGCTTCAATTGTGTGCTTTAGCACCGGATGGTGGCTTCTAACAACCGTTGATCATATCTGCGACGAATCACTCTTGCCGGCCGGTAGTCCCTGGACATGCCCCGGCGACGACGTGTTCTACAACGCTTCAATCATATGGGGCGTTGTTGGACCAGGAAGAATGTTCACCAGGGAAGGAATCTACCCTGAGTTGAACTGGTTCTTCCTGGTCGGACTTTTAGCTCCGGTTCCGGTTTGGTTACTTTCTAGAAAGTTCCCTGAACACAAGTGGATTGAACTCATCAACATGCCACTCATCATTCAAGGCGCCAGCGGCATCCCGCCGGCGAGAACGGTGAACTACATTATGTGGATAATTGTTGGGATATTTTTCAATGTGTATGTTTATAACAAGTTTAAGGCATGGTGGGCTCGCCATACTTATATTCTCTCCGCCGCCTTGGACGCCGGTGTTGCTTTCATGGGTGTGATGTTGTATTTTACACTCCAAAACTATGGTGTTTATGGTCCAAAATGGTGGGGGTTTGAGGCAGATGACCAATGCTATTTAGCAAAATGCCCCACAGCCTCGGGTGTAGTTGCTAAGGGATGTCCCATTTTATGA 3582 0.4179 MNEELMAKIKDEEIREAVFSMGGLKAPGPDGLNGLFFQQHWEILSKEVCGVVKQIFEEGCIPGDLGETTVVLVPKVSQPESLNQLRPISCCNFAYKIVTKVLVGRLRKVLDQIISPVQSAFVKGRLIQDNIIIVQEAFHMLNKKGNAGSQDLAIKLDMNKAYDRLEWNFMQRVMEELGFSNEWVRLVMSCVKSVTYRFKINGKLSSRITPQRGLRQGDPLSPYLFILAAESFTILMEKARRDRLISGIRLAQSAPVITHLLFADDCIIFAGAEEEEIFQLIQILNKYTEASGQRINIEKSGLIFGSQVGHSSPTNQQRIHKERDIPLRGGMDTRDMHQAERAEKHQPNAAQGRTMERSNHSGRVEGADRRRSADGYDPWRKGSRQRIVEAETTHPEDPPRHKKKRKNKRTTPSTASTSSLGINLKRGTSQLSVQWLTKTNASVVESVFLDSRFIPWSAPTHTSLESLSNWRTIKLRTTMAEVVHNGLQVEKHQSKVSSVDGDIINEVNDTPIEQVKLTVPINDDPNQPSLTFRTWVLGTMSCVVLSFVNQFFSYRTNPLFVSSMSAQIVAFPLGKFMAATLPKKPIQIPMTKLHFTLNPGPFTLKEHTLITIFASAGSSGVYAIGIITIVKAFYHRGIHPLAALMAFHEKEKRPKEGLTRLQFFLMVFGTSFAYYLIPGYLFQAISSVSIVCLIFKDSILAHQIGSGMKGLGIGSFGIDWNTVAGFLGSPLAVPAFAITNMLVGFVFFIYVVLPLAYWNNVFDAKRFPLISSHTFDFSGQRYNVTRILNVKTFDIDLESYQNYSKLYVSAVFALLYGLSFASLTATISHVILFNGKTIYQMWRKTTKTLKGEEVEDVHTRIMKKNYEQVPQWWFVSILVLMAVMALITCEGFGKQLQLPWWGVLMSLGIALVFTLPIGVIQATTNTQIGLNVITELIIGYIYPGKPLANVTFKTYGYISMSQALAFLGDFKLGHYMKIPPKSMFIVQLASTIVASIVCFSTGWWLLTTVDHICDESLLPAGSPWTCPGDDVFYNASIIWGVVGPGRMFTREGIYPELNWFFLVGLLAPVPVWLLSRKFPEHKWIELINMPLIIQGASGIPPARTVNYIMWIIVGIFFNVYVYNKFKAWWARHTYILSAALDAGVAFMGVMLYFTLQNYGVYGPKWWGFEADDQCYLAKCPTASGVVAKGCPIL 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00148 1193 CDD RT_nLTR_like 67 321 - -
Aip07g00148 1193 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 645 1193 - -
Aip07g00148 1193 SUPERFAMILY DNA/RNA polymerases 20 300 IPR043502 -
Aip07g00148 1193 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 505 644 - -
Aip07g00148 1193 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 667 1156 IPR004813 GO:0035673
Aip07g00148 1193 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 514 637 IPR004813 GO:0035673
Aip07g00148 1193 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 75 304 IPR000477 -
Aip07g00148 1193 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 643 1156 IPR004648 GO:0055085
Aip07g00148 1193 Pfam OPT oligopeptide transporter protein 530 640 IPR004813 GO:0035673
Aip07g00148 1193 Pfam OPT oligopeptide transporter protein 642 1154 IPR004813 GO:0035673
Aip07g00148 1193 MobiDBLite consensus disorder prediction 358 398 - -
Aip07g00148 1193 PANTHER ISP4 LIKE PROTEIN 645 1193 IPR004648 GO:0055085
Aip07g00148 1193 MobiDBLite consensus disorder prediction 307 423 - -
Aip07g00148 1193 MobiDBLite consensus disorder prediction 316 347 - -
Aip07g00148 1193 PANTHER ISP4 LIKE PROTEIN 505 644 IPR004648 GO:0055085
Aip07g00148 1193 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 54 332 IPR000477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00148 Aip-Chr7 1126083 1139547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00148 508 1193 Organic Solute Cotransporters AT4G26590 60.828 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00148 - - gmx:100776230 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00148 07 1126083 1139547 Aip07g00148 07 1126083 1139547 ECH