Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00142 ATGGAAAATGGTAGGGAGGATCATGAGATTGAGGACATGTCAATGTCAATGTCACCACCTTCTGTTGGTTCCATGCAAATAGCTGGAAGCAATGGCTTTGGCCACAGCATAGAGTTCATGTCTCAAGCATATCTTCCCAATAGGTACTCAGAAGTTGTCCTTAAAATTGTGGATTCAAGCATTAACCAAGATCCACCACTCCCCATATATCTGAAGTTTGAGGATGTAGAGTTCAAAGTGAAAAATAGCCAAACAGATTCCAACAACCCTTTAAAGAAAATGGTGACAAAGGTGGCCACACAACAAGTGGAACAAGAAAAATACAAGAAAATCCTTAAGGGTATCACAGGGAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGCAGTGGAAAAACAACTTTGTTGAAAGTAATTGGAGGAAGATTACTTGAGAATGTAAAGGGAAACATTACTTATAATGATGTTAGATTTAATCCTGCTATAAAGAGAAGGATTGGATTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACAATAGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAACAAAAATATGCAAAAGTGGAAAACACTATCAAGGAGTTAGGACTTGAAAGATGTCGCCACACGAAAATTGGTGGAGGATTTCTAAAAGGCATATCAGGAGGAGAAAGGAAGAGAACTAGCATAGGGTATGAAATTCTTGTTGATCCTTCATTGCTGTTACTTGATGAACCAACTTCAGGTCTTGATTCAACCTCAGCTAACAAACTTCTCCTCACTCTTCAAGGACTTGCCAAGGGTGGGAGGACCATAATAACTACAATTCACCAACCATCAAGCAGAATCTTTCATATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTGTTTATTATGGAAAGGCTAGAGACTCAATGGAATACTTTTCTTCATTGAGATTCGCCCCTGATATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGTCAAGTGAATGACATAAGTGTTCCTCAGGAAATTTTGGGAGATCAAGAATCTTCTGAGCCTTCAAAAGCTGTTATTAAGTATCTAAAACTCAAGTACAAAGAAATTCTGGACCCAAAAGAAAAGCTAGAGAACCATGGAGTGGTAAACACACCAAAACATCTTCAGCTAGCAATTCAGGTTAAAAAGGAGTGGACATTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCACAGCAAGATGCAAGGACTATTTTGATAAATTCAGACTAATTCAAGCCCTTGGAATTGCAATTATTTTGGGGCTACTTTGGTGGAAATCCTCAACCAACACAGAGGCTCAACTAAGAGATCAGGTAATTGGTTTAATGTTCTATATCTGCATATTTTGGACATCTTCATGTATCTTTGGAGCAGTATATGTTTTTCCATTTGAAAAAGCCTACATAGTGAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTATACTATGCATGCAGCACTCTGAGTGACATGGTAGCACATGTTTTCTATCCTACTTTCTTCATGATTATCTTGTACTTCATGGCCGGATTCAAGAGGACGGTCGCATGCTTCTTCTTAACATTGTTTGCAGTGCTGTTAATAGCCATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTAATACTAATGTTATTCCTTCTCACTGGTGGATACTATGTCCAGCACATACCAAAGTTCATGCAGTGGATGAAGTACCTTTCATTCATGTACTATGGATTCAGACTTCTTCTAAAAGTGCAGTATTCAGGAGACCAACTCTATGAATGTGAGAGCATAGGAGGGTGTAGGACCCTTCAGAGTTCACCTTCATTTGACACTGTTAATTTGAAAGGTGGCTTACAAGAAGTTTGGGTTCTCATAGCCATGGCATTATGCTTCCGTTTTCTTGCTTACTTCTGCCTCCGCAGAAACATTGATGTATGCAATTATTAG 2205 0.3605 MENGREDHEIEDMSMSMSPPSVGSMQIAGSNGFGHSIEFMSQAYLPNRYSEVVLKIVDSSINQDPPLPIYLKFEDVEFKVKNSQTDSNNPLKKMVTKVATQQVEQEKYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLLENVKGNITYNDVRFNPAIKRRIGFVTQEDVLFPQLTIEETLIFSAFLRLPTNMSKQQKYAKVENTIKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDSMEYFSSLRFAPDIPMNPAEFLLDLATGQVNDISVPQEILGDQESSEPSKAVIKYLKLKYKEILDPKEKLENHGVVNTPKHLQLAIQVKKEWTLSWLDQFIILYKRTFTARCKDYFDKFRLIQALGIAIILGLLWWKSSTNTEAQLRDQVIGLMFYICIFWTSSCIFGAVYVFPFEKAYIVKERKADMYRLSVYYACSTLSDMVAHVFYPTFFMIILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLILMLFLLTGGYYVQHIPKFMQWMKYLSFMYYGFRLLLKVQYSGDQLYECESIGGCRTLQSSPSFDTVNLKGGLQEVWVLIAMALCFRFLAYFCLRRNIDVCNY 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00142 734 Gene3D - 96 329 IPR027417 -
Aip07g00142 734 Pfam ABC transporter 112 262 IPR003439 GO:0005524
Aip07g00142 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 628 729 - -
Aip07g00142 734 SMART AAA_5 121 312 IPR003593 -
Aip07g00142 734 Pfam ABC-2 type transporter 291 351 IPR043926 GO:0140359
Aip07g00142 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 574 - -
Aip07g00142 734 Pfam ABC-2 type transporter 419 572 IPR013525 GO:0016020|GO:0140359
Aip07g00142 734 MobiDBLite consensus disorder prediction 1 27 - -
Aip07g00142 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 326 IPR027417 -
Aip07g00142 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 334 IPR003439 GO:0005524
Aip07g00142 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 628 729 - -
Aip07g00142 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 8 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00142 Aip-Chr7 1090167 1093513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00142 110 295 Calmodulin-binding Proteins AT2G36910 30.890 2.50e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00142 K05681 - gmx:100815259 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00142 07 1090167 1093513 Aip07g00142 07 1090167 1093513 ECH