Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03922 ATGGGAACCCTTGGGAGAGCCATATACACTGTTGGATTCTGGATTCGAGAAACCGGTCAAGCAATTGATCGCCTCGGTTCCCGTTTTCAAGGGAAATATTACTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGACAAGACTCCTCTGGTTGATAAGGATGCATTTGTTGCCCCAAGTGCTTCCGTCATCGGTGATGTTAAAATTGGAGGTGGATCATCAATTTGGTATGGATGTGTCTTGAGAGGTGACGTGAACAGCATCAGTGTTGGTAGCGGAACCAACATACAGGACAACTCCTTAGTGCATGTTGCGAAGTCAAATTTAAGTGGAAAGGTGTTGCCTACTATTATTGGAGACAAAGTTACTGTAGGTCATAGTGCTGTTCTACATGGTTGCGTCGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAACACTACTTGACGGTGTTGTTGTTGAGAAACATGCGATGGTTGCTGCTGGATCCCTTGTGAGACAGAATTCAAAGATTCCAAGTGGAGAGATATGGGCAGGCAATCCAGCAAAGTTCCTGAGGAAGCTCACTGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAACTATACTAACCTTGCTCAGGTGCACGCAGCAGAAAATGTGAAATCATTTGATGAAATCGAGTTTGAGAAGGGGTTACGAAAGAAGTATGCACGTAAGGACGAGGAGTATGACTCAATGCTCGGTGTTGTCCGTGAGATTCCTCCAGAGCTTATTCTTCCAGAAAATATCCTACCGAAACAACAAGAAAAGTCTCTTAAAATTTGA 822 0.4428 MGTLGRAIYTVGFWIRETGQAIDRLGSRFQGKYYFQEQLSRHRTLMNIFDKTPLVDKDAFVAPSASVIGDVKIGGGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDKVTVGHSAVLHGCVVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVRQNSKIPSGEIWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENVKSFDEIEFEKGLRKKYARKDEEYDSMLGVVREIPPELILPENILPKQQEKSLKI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03922 273 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Aip06g03922 273 CDD LbH_gamma_CA_like 55 212 - -
Aip06g03922 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 270 - -
Aip06g03922 273 Gene3D Hexapeptide repeat proteins 43 222 - -
Aip06g03922 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
Aip06g03922 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03922 Aip-Chr6 136874032 136877566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03922 120 196 Miscellaneous Gene Families AT2G17640 33.721 4.30e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03922 K01726 - rcu:8288953 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03922 06 136874032 136877566 Aip06g03922 06 136874032 136877566 ECH