Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03906 ATGGAAAATGTGCCTTGGCATGCCGATGTGAAAGCTTTTTCAGAGGCCCTTGCTCTGAAAAGCCTAGGGGAGTATGAAGTTGCTTGTGAACATGCTCATTCATGTTGTGTTCTCTTAGCAAAGACTAAGAAGTTCAAGATGGATGGCAAGTGGTATACATGGATAGACTACGATAAATTTCATGACCTGGTAGTAAACCAAGCTTTAGAAGATTTGCTCTTTTTCTCCAACCCGGGGTTTTACCGACCAGGGTCGCCGGCTACATTGGGCAATACAGCCAAAATGTCAGATGGATGTTACTTGGCTATGTCGGACAGTCTGATACAGGGCTGTCCGAATCTCCAGAAACTCGAAATGAGAGGCTGTTCCTTTTTCAGTGAGCGTGCACTAGCCATTGCTGCAATGTGCCTTCTCTTGGTACTTGTGGGTGCAAGGCTATGGTGCCTCTTCTTCTGGACGCGATCTTTTGGCTATGGCTTGCCCCTTTTGGAATATCGAGTTGATTCCTTCTAG 513 0.462 MENVPWHADVKAFSEALALKSLGEYEVACEHAHSCCVLLAKTKKFKMDGKWYTWIDYDKFHDLVVNQALEDLLFFSNPGFYRPGSPATLGNTAKMSDGCYLAMSDSLIQGCPNLQKLEMRGCSFFSERALAIAAMCLLLVLVGARLWCLFFWTRSFGYGLPLLEYRVDSF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03906 170 Pfam Wyosine base formation 1 41 IPR013917 -
Aip06g03906 170 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 1 67 IPR034556 GO:0008033|GO:0051539
Aip06g03906 170 Gene3D Aldolase class I 1 54 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03906 Aip-Chr6 136772250 136773835 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03906 K15449 - gmx:100791920 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03906 06 136772250 136773835 Aip06g03906 06 136772250 136773835 ECH