Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03894 ATGCCATCCAATAATTACTTTTCAAAGCTAAGTTCAATTGTGCAGAAGAAGGGTGGAATCAAGTGCTGTTCTGAGGTTCTGATTGGGCAAGGGAGATTGTGGTTTGGTTTGGATTCAAGGCTTTTCCATTCTATGAATTTCTCATCCTGTATGGACCTTAACCGAATTGGTGGTGTTGGATTGACTTCAAGTTCAGAACTAGGAAGGAGAACCTTGTCTGTAGCCGACACGTTGTCGCGTACAGTTTCGACTCCATCCATATCAGGGCCTTCATTTCAGGTCTGTGGATACCACATTGGTCGTTCACTTTCTAGACCTGAGCAGTTTTCGGCCGCCACGAAACCTCAGAGTAAAACTATGGCTAGTCCCTTGCCCAGAGCTATGTTTGGAGAATGCTATTTAGATAACCCAAATTTGAAGTGTGGTTGCCGATCACCGTCGATAAAGAATAGGAGTAATATCGGTTTAAGCAAGAGTTTGGCCAATGGGAAAAAAGTCATGATGAGTTTGGAAAATAATCATCGGCCAGATAATTCAGTGATTTATGGATATTTTGTTTACAGTGCTGCAAAGACATGGTTCAGTTCTCATGCTTACACAGAGCCTTGGTCTAAAGGTTTTCATAGCTCGCTGGCATCATCTTCCTCGGTTGGGCCTGCTCATGATGTACATTTTGACTCCTCCTGGGAAGAGCAGCTAGCAAATTCTGCAGAGTCAGCTGAACAGAAAAACCCTGTGTGCCAAAACCTCAAGTTAGTATCAGGATCATGCTACTTGCCTCATCCCGATAAAGAAGAAACTGGTGGAGAAGATGCCCATTTTATATGTTCACAGGAACATGCAATTGGTGTGGCCGATGGTGTTGGTGGCTGGGCAGATAGTGGTGTTAATGCCGGATTTTACTCTCGTGAACTCATGTCCCATTCGGTAGATGCTATTCAGGAGGAGCCTAAAGGTTCAATTGACCCTGCTAGGGTGCTGGAGAAAGCACACTCAATTACAAAAGCTATGGGTTCCTCTACAGCATGCATCATCGCACTTACTGACCAGGGTCTTAATGCTATTAATGTGGGAGATAGCGGGTTTATGGTGATCCGTGATGGGTGCACTGTATTCCGATCCCCTGTGCAGCAACATGGCTTCAATTTCACCTATCAGCTTGGTACTAATGGTGATTTACCTAGTTCTGGTCAGGTTTTCACAATTGCTGTTGCTCCTGGAGATGTCATCGTCGCCGGTACAGATGGTCTGTTCGATAACTTATACAACAACGAGATTACGGCGGTCGTGGTTCACGCTGTAAGAGCTGGATTTGGTCCGCAGGTGACAGCCCAGAAGATAGCTGCGTTGGCGCGTCAACGAGCGTTAGACAAAAACAGGCAGACCCCTTTCTCGACTGCGGCTCAAGATGCCGGAATTCGTTACTATGGCGGCAAGCTTGATGATACTACAGTTGTAGTTTCATATATTACTGGCACAAAGAATGCATAA 1491 0.4541 MPSNNYFSKLSSIVQKKGGIKCCSEVLIGQGRLWFGLDSRLFHSMNFSSCMDLNRIGGVGLTSSSELGRRTLSVADTLSRTVSTPSISGPSFQVCGYHIGRSLSRPEQFSAATKPQSKTMASPLPRAMFGECYLDNPNLKCGCRSPSIKNRSNIGLSKSLANGKKVMMSLENNHRPDNSVIYGYFVYSAAKTWFSSHAYTEPWSKGFHSSLASSSSVGPAHDVHFDSSWEEQLANSAESAEQKNPVCQNLKLVSGSCYLPHPDKEETGGEDAHFICSQEHAIGVADGVGGWADSGVNAGFYSRELMSHSVDAIQEEPKGSIDPARVLEKAHSITKAMGSSTACIIALTDQGLNAINVGDSGFMVIRDGCTVFRSPVQQHGFNFTYQLGTNGDLPSSGQVFTIAVAPGDVIVAGTDGLFDNLYNNEITAVVVHAVRAGFGPQVTAQKIAALARQRALDKNRQTPFSTAAQDAGIRYYGGKLDDTTVVVSYITGTKNA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03894 496 Pfam Stage II sporulation protein E (SpoIIE) 281 488 IPR001932 -
Aip06g03894 496 SMART PP2C_4 243 488 IPR001932 -
Aip06g03894 496 PANTHER PROTEIN PHOSPHATASE 84 495 - -
Aip06g03894 496 PANTHER PROTEIN PHOSPHATASE 2C 84 495 IPR039123 -
Aip06g03894 496 ProSiteProfiles PPM-type phosphatase domain profile. 256 490 IPR001932 -
Aip06g03894 496 SMART PP2C_SIG_2 265 490 IPR001932 -
Aip06g03894 496 Gene3D - 392 495 IPR036457 -
Aip06g03894 496 Gene3D - 264 382 IPR036457 -
Aip06g03894 496 SUPERFAMILY PP2C-like 257 487 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03894 Aip-Chr6 136669681 136672385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03894 K17508 - gmx:100805475 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03894 06 136669681 136672385 Aip06g03894 06 136669681 136672385 ECH