Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03818 ATGCCAAGTATGTCATCCGTTCAGAGGTCAAAATCATGTGTTGAACTTCAGCCCCCAACTTATGGGAACTTAATTACCATTCTTAGCATTGATGGAGGTGGAATTAGGGGCATTATTCCAGCTACCATTCTTGAATTCCTTGAATCTCATCTTCAGGAGTTAGATGGTGAAGATGCAAGACTTGCAGATTATTTTGATGTGATATCAGGAACAAGTACTGGAGGCCTTGTAACTGCAATGTTAACTGCTCCAGATCAAAATAATCGTCCACTTTTTGCTGCTAAAGATATCAAACCATTTTACTTGGAGCACTGCCCAAAAATTTTCCCACAACCTAGAGGCTTAGGTGCAACATTGATGGCAAAGATGATAAGACAATTGGGAGGACCAAAATATGATGGAAAATACTTGCATGGAGTGGTTAGAGAGAAACTTGGAGATATTCGTTTGCGTGAGACAATCACCAATGTTGTCATTCCCACCTTTGACATCAAATGTTTGCAACCAATTATTTTCTCATCATACCAGATTAAGAGTTGGCCTTGCTTGGATGCTAAACTATCAGACATATGCATTAGCACCTCAGCTGCACCTACTTATCTGCCTGCCCATCACTTCACCAACAAAGATTCAAAAGGAAATAATGTACATGAATTCAACCTCGTTGATGGTGGTGTTTGTGCTAATAATCCGACTTTAGTTGCCATGAATCAATTAACAAAGCAAATGATAGATGAAAATGTTGATTTCTTTCCAATCAAACCTTCGGACTATAGCCGGTTCTTAATAATTTCAATAGGAACTGGAACAGCCAAAAATGAAGAAAAATTCAATGCAAAAGTTGCAGCTAAATGGGGGCTATTGGATTGGTTAACTCAAGGTGGTTCCACTCCCTTAATTGATGTTTTCTCTCAATCAAGTTCTGATATGGTTGATTTCCATATAGCTACTCTCACTCGAGCACTTCATTCAGAAGAAAATTACCTCCGGATACAGGATGACACATTGATTGGAAATGATTCTTCAGTTGATATTTCTACTAAGGAGAATTTGGAGAGACTTTGCCAAATTGGTGATAATTTGTTGAAGAAACCGGTTTCTAGGGTTAATTTGGAGAATGGTCAAATTGAACCCTTAGAAAATGGAGGAACCAATGAAGAAGCTCTCAAAAGGTTTGCAAAAATATTATCACAAGAAAGGAGACTTCGTGACATGAGATCTCCTCACACTAAGAAGGCATCATACTACTAA 1251 0.3829 MPSMSSVQRSKSCVELQPPTYGNLITILSIDGGGIRGIIPATILEFLESHLQELDGEDARLADYFDVISGTSTGGLVTAMLTAPDQNNRPLFAAKDIKPFYLEHCPKIFPQPRGLGATLMAKMIRQLGGPKYDGKYLHGVVREKLGDIRLRETITNVVIPTFDIKCLQPIIFSSYQIKSWPCLDAKLSDICISTSAAPTYLPAHHFTNKDSKGNNVHEFNLVDGGVCANNPTLVAMNQLTKQMIDENVDFFPIKPSDYSRFLIISIGTGTAKNEEKFNAKVAAKWGLLDWLTQGGSTPLIDVFSQSSSDMVDFHIATLTRALHSEENYLRIQDDTLIGNDSSVDISTKENLERLCQIGDNLLKKPVSRVNLENGQIEPLENGGTNEEALKRFAKILSQERRLRDMRSPHTKKASYY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03818 416 CDD Pat17_isozyme_like 22 374 - -
Aip06g03818 416 Pfam Patatin-like phospholipase 28 236 IPR002641 GO:0006629
Aip06g03818 416 PANTHER XYLOSE ISOMERASE 9 412 - -
Aip06g03818 416 SUPERFAMILY FabD/lysophospholipase-like 24 372 IPR016035 -
Aip06g03818 416 Gene3D Cytosolic phospholipase A2 catalytic domain 15 408 - -
Aip06g03818 416 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 28 236 IPR002641 GO:0006629
Aip06g03818 416 PANTHER PATATIN 9 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03818 Aip-Chr6 135887664 135893488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03818 16 411 Miscellaneous Gene Families AT2G26560 65.152 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03818 - - gmx:100777122 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03818 06 135887664 135893488 Aip06g03818 06 135887664 135893488 ECH