Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03648 ATGGAAGCCATGAAGCAGGAAAAGCTCTGCCGCCGGCAGGACACTGCCCTTGCCTCCGCCGCATCGAAGCTCGCCGTCGACGAGGACGACCCCCTCGCTGGAAACTACGGCGACATCACAATGGAGTTCCTGCAGTCGAAGACCATGGACCCCAGCGCATGGACACGGGTTGTGAATCTGGAGAAGTCTCTAGAAGGGAAGCACGTTCTGATCCGAGCTAGGGTTCAGGCGATCCGTCGCGTTGGGAAGAAGATGGCCTTGTTGGTTGTGAGAGAGAAGGGCTTCACCGTGCAGTGTTTGGTGCAAGAGCAGCGAGATTTGGTTAGCGTGCAGATGGTGAAGTACGCTGCCGCGCTGAGCCGCGAATCTGTTATCGATGTTGAAGGTCTTGTTTCGGTCCCTTCGGAATCAATCAAAGGTGCCACACAGCAGGTGGAAGTTCAAGTGAGGAAGTTGTATTGTGTTAGCAGGGCCCCTCCAACTCTACCCTTTAATCTCGAGGATGCTGTTCGAAGTGAAGCTGAAATTGAGAAGGCTCTTCAGGCTGGTGAACAACCTGTTCGTGTTAATCAGGATACACGTTTGAAGTCTAGAGTATTTGAGCTCAGAACCCCGGCTAATCAAGGAATTTTCCGTATTCAGTCACAAGTTGGAAACGCATTCAGAAAATTCTTGTCATCTGAAGGCTTTGTTGAAATCTACACTTCAAAGTTGATTGCTCTTTTGAACTATAAAGGGCACCCTGTATGCCGTGCTGAATCACCACACCTCCACAAGCAAATGCCAATATATGCTGATGTTGGCCGTGTTTTTGAAATTGGTCCTGTGTTTAGGGTTGAAGATTCCCTCACACCCAGACATCTGTGTGAGGTTACCGGTCTTGATGTTGAAATGGAGATTATGGAGCATTATGATGAGGTTATGGATATAGTTGATAGGTTGTTTTACCCATTTGAACCTTTAAAGTATCTTCGTCTAACATATGAAGAAGGGGTTCAGATGCTCAAGGTATGGCATGGAGTTCTATATCCTTTACCGATACCCCTTGGCTGGAAGCCCATTTTACACAATGCGCCTTGCTATGATAATTCACAGTACTCCAACTCATTTAATGTTTTTATTAGAGGTGAGCAGATTCAGGAGCTCAGCATGTCCACGATGCAGAGATGTTGGAAAAACGGGCTAAGACTTGCAGCATTGATGTCAAGAAGATATCTACATATATTGATTCTTTCAGATATGGTGTACCACCACACGGTGGGTTTGGAGTTGGTTTGGAGCGTTTAG 1287 0.4716 MEAMKQEKLCRRQDTALASAASKLAVDEDDPLAGNYGDITMEFLQSKTMDPSAWTRVVNLEKSLEGKHVLIRARVQAIRRVGKKMALLVVREKGFTVQCLVQEQRDLVSVQMVKYAAALSRESVIDVEGLVSVPSESIKGATQQVEVQVRKLYCVSRAPPTLPFNLEDAVRSEAEIEKALQAGEQPVRVNQDTRLKSRVFELRTPANQGIFRIQSQVGNAFRKFLSSEGFVEIYTSKLIALLNYKGHPVCRAESPHLHKQMPIYADVGRVFEIGPVFRVEDSLTPRHLCEVTGLDVEMEIMEHYDEVMDIVDRLFYPFEPLKYLRLTYEEGVQMLKVWHGVLYPLPIPLGWKPILHNAPCYDNSQYSNSFNVFIRGEQIQELSMSTMQRCWKNGLRLAALMSRRYLHILILSDMVYHHTVGLELVWSV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03648 428 Gene3D - 33 160 IPR012340 -
Aip06g03648 428 PANTHER ASPARTYL-TRNA SYNTHETASE 17 316 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
Aip06g03648 428 Gene3D Bira Bifunctional Protein; Domain 2 163 341 IPR045864 -
Aip06g03648 428 Pfam tRNA synthetases class II (D, K and N) 191 315 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aip06g03648 428 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 269 375 IPR006195 -
Aip06g03648 428 SUPERFAMILY Class II aaRS and biotin synthetases 190 384 IPR045864 -
Aip06g03648 428 PANTHER ASPARTATE--TRNA LIGASE, CYTOPLASMIC 17 316 - -
Aip06g03648 428 SUPERFAMILY Nucleic acid-binding proteins 34 161 IPR012340 -
Aip06g03648 428 CDD AspRS_cyto_N 68 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03648 Aip-Chr6 133912900 133917615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03648 K22503 - gmx:100788164 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03648 06 133912900 133917615 Aip06g03648 06 133912900 133917615 ECH