Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03647 ATGGCGTCGCAAGATTCGCTTCCGAAGACCGCCGACTCTTCGAAGCTTGCCGATCATCATACTCTTCTCAGCATCTGCAACTCTCTTGCCGCTGGTGGAATCGCAGGTGGAGTGTCGCGAACAGCTGTGGCTCCTTTGGAGAGATTAAAGATTCTGCTGCAGGTAGTCCAAAATCGTGACAATATAAAATACAAAGGAACTATTCAAGGCTTAAAATATATATGGAGAACTGAGGGTTTTAAAGGGATGTTTAAAGGAAACGGAACTAACTGTGCCCGTATTGTCCCAAATTCGGCAGTGCAGTTCTTAAGCTACGAGGAAGTATCTAGGGGTATTTTGTGGCTCTACCGGCAACAAACTGGAAACGCGACAGAGGCATCCCCACACCAATACAGAGGAATTTTTCATGCTCTGTCAACAGTTTTCCGGGAAGAAGGCCCTCGAGCCTTGTATAAAGGATGGTTACCATCAGTCATAGGAGGAGTTATACCATATGTAGGTCTCAATTTTTCAGTGTATGAATCTTTGACGGACTGGTTGATTCGATCCAATCCACTTGGAATAGCTAAAGACTCTGAGCTAAGTGTTACCACAAGGCTTGCATGTGGGGCAGCCGCTGGCACTGTTGGTCAGACAGTGGCTTACCCCCTTGATGTCATTCGCCGGAGAATGCAGATGGTAGGCTGGAAAAATGCTCCTTCAGTTGTTGCTGGTGATGGAAAGAGCAAAGCTGAGTACGCTGGCATGGTTGATGCATTCAGGAAAACTGTGCAGCATGAAGGATTTGGAGCATTATACAAGGGCTTAGTACCCAATTCAGTGAAGGTGGTCCCGTCTATAGCTATTGCTTTCGTGTCATATGAGATGGCGAAGGACATGCTCGGAGTTGAATATCGGACATCTGACTGA 909 0.4664 MASQDSLPKTADSSKLADHHTLLSICNSLAAGGIAGGVSRTAVAPLERLKILLQVVQNRDNIKYKGTIQGLKYIWRTEGFKGMFKGNGTNCARIVPNSAVQFLSYEEVSRGILWLYRQQTGNATEASPHQYRGIFHALSTVFREEGPRALYKGWLPSVIGGVIPYVGLNFSVYESLTDWLIRSNPLGIAKDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKNAPSVVAGDGKSKAEYAGMVDAFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVSYEMAKDMLGVEYRTSD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03647 302 PANTHER SOLUTE CARRIER FAMILY 25 124 297 - -
Aip06g03647 302 Gene3D Mitochondrial carrier domain 20 114 IPR023395 -
Aip06g03647 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 293 IPR018108 -
Aip06g03647 302 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 124 297 - -
Aip06g03647 302 Pfam Mitochondrial carrier protein 117 183 IPR018108 -
Aip06g03647 302 Pfam Mitochondrial carrier protein 24 111 IPR018108 -
Aip06g03647 302 Pfam Mitochondrial carrier protein 193 294 IPR018108 -
Aip06g03647 302 PANTHER SOLUTE CARRIER FAMILY 25 13 123 - -
Aip06g03647 302 PRINTS Mitochondrial carrier protein signature 28 41 IPR002067 GO:0055085
Aip06g03647 302 PRINTS Mitochondrial carrier protein signature 203 225 IPR002067 GO:0055085
Aip06g03647 302 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Aip06g03647 302 PRINTS Mitochondrial carrier protein signature 86 106 IPR002067 GO:0055085
Aip06g03647 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 111 IPR018108 -
Aip06g03647 302 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 13 123 - -
Aip06g03647 302 Gene3D Mitochondrial carrier domain 115 296 IPR023395 -
Aip06g03647 302 SUPERFAMILY Mitochondrial carrier 23 288 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03647 Aip-Chr6 133909361 133912166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03647 27 297 EF-hand Containing Proteins AT5G51050 33.882 2.18e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03647 K14684 - gmx:100784834 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03647 06 133909361 133912166 Aip06g03647 06 133909361 133912166 ECH