Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03637 ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCGCCTACAACTCCTTCTCCCTCCTTCACCGCTCGCATTCCCCTTCCTCCTTCAGGTGACAGCCCTCCTAATGTTGAATCTAATTCAGCTCTGGTTCCTATCCATATTGTGACAACTGCATCTCAACTCCCAACTGAGTTTCTGGAACCATCGCCGCAGCACCAGTTCATCATTGGTTTTGATTGTGAGGGCGAAGACTTGTGTCGAACTGGAGCTCTATGTCTAATACAGCTTGCATTCCCAGATGCCATTTACTTGGTTGACGCAATAGAAGGTGGGGAAGCGCTGATCAAAGCCTGTAAGCCTGCGCTCGAGTCCAATTTCATCACAAAAGTGATTCATGATTGCAAAAGGGATAGTGAGGCATTGTACTTCCAGTTTGACATCAAGCTGAACAACGTGATGGATACCCAGATTGCATATGCACTGATCGACGAGCAAGAAGGGAAGCGGAAAAGAGATGACAACATTTCTTTTGTTGACCTCCTAGCTGATCCACGTTTTTGTGGCATATCATATGATGAGAAGGAAGAGGTTCGGGTTCTCCTTCGACAGGACCCCAAGTTTTGGAGATATAGACCTTTTTCTGAACGTATGGTCCGCACAGCTACTGATGATGTCCGTTTTCTTCTGTATGTTTATCACCGAATGATGGTGAACTTGAATGAGCGGTCCTTATGGCATCTTGCGGTTCGTGGTGCCCTGTATTGCCGATGTTTTTGTGTGAACAATAATGATTATGCTGATTGGCCATCTCTGCCTCCTATCCCAGATACGCTGAAAGTTGATGGAAATGATCTGGAGGAAGAAATTCTTTCAGTAGTAGACATTCCCCGAGGAATGATGGGACGAGTTATTGGTAGAAGGGGGGCTACAATCTTGACAATTAAGGAGGGATGCAATGCGGAAATTGTCATTGGAGGTTCGAAGGGCCCACCTGACAAGGTCTTCATCATTGGACCAGTGAAGCAGGTGTTGAAAGCTGCGGCATTGATTAGGGGTAGAATCATAGATATATAG 1056 0.4583 MASSSSSSSSSSAPTTPSPSFTARIPLPPSGDSPPNVESNSALVPIHIVTTASQLPTEFLEPSPQHQFIIGFDCEGEDLCRTGALCLIQLAFPDAIYLVDAIEGGEALIKACKPALESNFITKVIHDCKRDSEALYFQFDIKLNNVMDTQIAYALIDEQEGKRKRDDNISFVDLLADPRFCGISYDEKEEVRVLLRQDPKFWRYRPFSERMVRTATDDVRFLLYVYHRMMVNLNERSLWHLAVRGALYCRCFCVNNNDYADWPSLPPIPDTLKVDGNDLEEEILSVVDIPRGMMGRVIGRRGATILTIKEGCNAEIVIGGSKGPPDKVFIIGPVKQVLKAAALIRGRIIDI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03637 351 ProSiteProfiles Type-1 KH domain profile. 282 344 - -
Aip06g03637 351 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g03637 351 Gene3D K Homology domain, type 1 275 350 IPR036612 GO:0003723
Aip06g03637 351 PANTHER - 23 348 - -
Aip06g03637 351 MobiDBLite consensus disorder prediction 1 38 - -
Aip06g03637 351 Pfam KH domain 287 345 IPR004088 GO:0003723
Aip06g03637 351 SUPERFAMILY Ribonuclease H-like 38 256 IPR012337 -
Aip06g03637 351 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 277 348 IPR036612 GO:0003723
Aip06g03637 351 CDD Egl_like_exo 59 253 - -
Aip06g03637 351 SMART 35exoneu6 46 234 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aip06g03637 351 Pfam 3'-5' exonuclease 48 232 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aip06g03637 351 PANTHER EGALITARIAN, ISOFORM B 23 348 - -
Aip06g03637 351 SMART kh_6 281 349 IPR004087 GO:0003676
Aip06g03637 351 CDD KH-I 287 344 - -
Aip06g03637 351 Gene3D - 3 250 IPR036397 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03637 K18740 - gmx:100788577 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03637 06 133766882 133772528 Aip06g03637 06 133766882 133772528 ECH