Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03621 ATGGCGGAAGAATCGCAATATGAAACTTCCACCACTCCTCCCTCGTTGAAGCGCAAGTACGACGACCAACAACCACCGCCCTCCGCCCGCCAAAGCGGTTTTTCCTCCCCTGACGCCCCCCCTCCACCGTCATACAACAGCGTCCCTCCGCCGGCCCCCTCTGGCATCGAGCTCGCCAAGCAGCGTGCACAGGAGGTCGCCGCCCGCCTCCTTAGCGGCGCCCCACCCCCCGCAGCCACGGGTCTCGACGTCAAGCGTCCCAAGGTCGATAACGGCACAGCTCCTCCTTCGGGTTTCGATTCCATGGGTGATGTGAAGGCTCAGTACTCGGTCCCTACCATTTCTCCTTCTGCGGTTTCTTATGGGTACCAGGGTGCGAGCAAGAAGATTGATATCCCCAATGGAAGGGTGGGTGTTATTATTGGCAAGGGTGGTGAGACCATCAAGTACCTTCAGCTCCAATCTGGGGCAAAAATTCAGGTTACCCGTGACATGGATGCCGACCCCAATTTGCCCACTAGGACAGTTGAGCTTACGGGCACTTCTGAAGCCATTGCTACTGCTGAGAAGCTCATCAATGAAGTTCTTGCTGAGGCTGAATCCGGAGGTTCTGGCATTGTTGCTAGACGAGTAGCTGGACAAGCTGGTTCTGATGAATTTGTGATGAAGATCCCAAATAACAAGGTTGGCCTTATAATCGGTAAAGGTGGGGAAACAATCAAGAATATGCAAGCTTCAACTGGTGCAAGAATTCAGGTGATTCCTCTTCATCTTCCCCCCGGTGACACATCCACAGAAAGAACATTAAAAGTTGAAGGGACACCTGAACAAATTGAGTCTGCAAAACAATTGGTTAATCAAGTCATCAGTGGTGAGAATCGTCTTAGAAATCCAGCAATGTCTGGTGGTTATGCTCAGCAAGGTTACCAATCCCGGCCACCATCTAGCTGGGGTCCTCCCGGTGCTCCCATGCAGCAAGCTGGTTATGGTTACGTGCAGCCCGGTGGCTACTCTGGTCCAACAGGCCAGTATAACCAGCAACCATATGCAGGCTATCCACCTGCTTCATCTGGTGGATACTCCACCAATTGGGACCAGTCCTCTGCACCACCAGCCCAGCAGTCTACTCATGGTGCTGGGTATGATTACTATGGTCAACAGCAGCAAAATCCTGGCGGTGCACCTCCTGCTGATGGGAGTGGTTACAATTATAGTCAACCACCTTCCTCTGGTTATAGCCAACCTGGGCATGGCTATTCTCAAGATGGCTATGGTGGGTATCATGCACCACCGCAATCAGGGTATGGGCAGCAACCATCATATGATCAACAGCAAGGTTATGGCTCAGCCCCTAGCTATGGCAGTGGAAGCAACACAGCACAAGAGGGCCACGCTCCTAATTATGGATCACATGGTGATTCAACCCAAGTTCCACCTGCGCAACCCTCTTCAACGTCTCAGCAAGGTTATGGTTCTGGCCAACAGCCAAGTCCAAATGCTGCCAACTATCCTCCACAAGGTTCTGCTCAGCCTGGCTATGGGGTGCCCCCGACTTCCCAAGCAGGGTATGGAAATCCACCTCCCCAATCTGGTTATGGAGGTGGCTATGGTCCCCCACCACAGTCGCAAAAGCCGGGTGGTACACCACCTGCCCAGCCACTACCTTACGATCAACAGGAACCAGGGTCTCAAAGGGCTCCACCAACTGGTTATGGCAGTGCAGGACAACCAGGGTATGGTCCCCCATATGGTGCTCCAGGTGGTCAACCTGGATATGGTCAGCCTCCGACATCATACAGCAACAGTTACGCTTCTGGTTACCCTCAGCCTCTGGCATATTCTGGTGATGGTAATGCAGGAGCACCTGCGCAGGCTGCTCAACAGGGAAGTGTTCCTAAAACTTCACCTGAGAGTTGA 1917 0.5321 MAEESQYETSTTPPSLKRKYDDQQPPPSARQSGFSSPDAPPPPSYNSVPPPAPSGIELAKQRAQEVAARLLSGAPPPAATGLDVKRPKVDNGTAPPSGFDSMGDVKAQYSVPTISPSAVSYGYQGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNLPTRTVELTGTSEAIATAEKLINEVLAEAESGGSGIVARRVAGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKVEGTPEQIESAKQLVNQVISGENRLRNPAMSGGYAQQGYQSRPPSSWGPPGAPMQQAGYGYVQPGGYSGPTGQYNQQPYAGYPPASSGGYSTNWDQSSAPPAQQSTHGAGYDYYGQQQQNPGGAPPADGSGYNYSQPPSSGYSQPGHGYSQDGYGGYHAPPQSGYGQQPSYDQQQGYGSAPSYGSGSNTAQEGHAPNYGSHGDSTQVPPAQPSSTSQQGYGSGQQPSPNAANYPPQGSAQPGYGVPPTSQAGYGNPPPQSGYGGGYGPPPQSQKPGGTPPAQPLPYDQQEPGSQRAPPTGYGSAGQPGYGPPYGAPGGQPGYGQPPTSYSNSYASGYPQPLAYSGDGNAGAPAQAAQQGSVPKTSPES 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03621 638 MobiDBLite consensus disorder prediction 1 104 - -
Aip06g03621 638 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 128 203 IPR036612 GO:0003723
Aip06g03621 638 MobiDBLite consensus disorder prediction 593 608 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 621 638 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 338 394 - -
Aip06g03621 638 ProSiteProfiles Type-1 KH domain profile. 217 285 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 296 638 - -
Aip06g03621 638 CDD KH-I 127 192 - -
Aip06g03621 638 SMART kh_6 216 290 IPR004087 GO:0003676
Aip06g03621 638 SMART kh_6 124 197 IPR004087 GO:0003676
Aip06g03621 638 MobiDBLite consensus disorder prediction 542 556 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 36 50 - -
Aip06g03621 638 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 74 595 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 1 18 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 402 417 - -
Aip06g03621 638 ProSiteProfiles Type-1 KH domain profile. 125 192 - -
Aip06g03621 638 MobiDBLite consensus disorder prediction 433 506 - -
Aip06g03621 638 Pfam KH domain 221 286 IPR004088 GO:0003723
Aip06g03621 638 Pfam KH domain 129 194 IPR004088 GO:0003723
Aip06g03621 638 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 220 292 IPR036612 GO:0003723
Aip06g03621 638 CDD KH-I 219 285 - -
Aip06g03621 638 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 74 595 - -
Aip06g03621 638 Gene3D K Homology domain, type 1 214 328 IPR036612 GO:0003723
Aip06g03621 638 Gene3D K Homology domain, type 1 120 213 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03621 Aip-Chr6 133610087 133616849 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03621 K13210 - gmx:100813135 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03621 06 133610087 133616849 Aip06g03621 06 133610087 133616849 ECH