Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03603 ATGGAGAATTATCAGCAAGGAAAGGAGATTGAGAAGTTCACATGGGTAATTGAAAGTTTCTCAAAGAAGAACACCAAGAAGCTACGATCCAAGTCCTTCCAAGTTGGTGGTTGTAAATGGCAGATACATGTGCATCGAATAGAAAAAGCAAAAGGTATGGAGTATTTATCGTTGTATTTGAAGGTTGGAGGTTCTGTACCATCATTTGGATGGAGCAAATATGCATATTTCAGTTTAGCTCTAATTAATCACATGGATCCCCAAAAGTCAGTTGTAAGAGAGACACAACAGAAGTTCAATGCTGGATACCGTAGCTGGGGTTCAAGCTTTGTGGCTCTGAATGACTTCTATGATCCTAAACAAGGATATCTCCTCAACAATGTTTGCATCATTGAAGTCCGAATCTCTGTCTCCGATGTTGCATTTGACACCAACATTTTTAATATTAATAATAATGTCTCATCATCTACTCATCACTCTAATAATCAAACTTCAAATGAGACACTGAGCCGTTCAACTTCAACCACAACCCAAGAAGATGATGTTAATGGAATAACAACATTACAACCTAATTCAGATGATGTAGTACACTATGTGCCTACAGCACCACCTCTATTATATCCTACTATTATATGTGATGATGAACCTTTAGTAGTGCCCTTAAACACTACTACTCTTAGTGAGATTCTAGATGTGAAAAGCTTAGGAGAAGAAGAAAAAGCTTATGTTCCCTTGTTGGAAGAGGTATGTTCATGGCACCCTTCGCTGATCCAAAGCCAAATGAGAAAGAGTCCGAAATTCATTCAATGGGCATTCATAGCATTAGGTCAAGTTCTACATTTCCTCAAGACAACAAAGGCAAAGGACATGGACGAGAATGCATTCAACAAACTCCAATGTCTTTGGGAGGAGCTTCAGTTGTTCGGATTCGAGCTGAGTTGGTTGGAGCCCCATATTGAGATGAAGATGCTCAAAGCCAAAATGGCTGTGACAGAAATCGATCTTGAGTTGGCAAAGAGAGACTTGGCAATGGCAGAGGTACAAATGGGATTTGAAGAAAAGGACATGGATAAGGAACTGGGTTATGGTTATGGTTATGGTTATGTCATATCTTAA 1116 0.3916 MENYQQGKEIEKFTWVIESFSKKNTKKLRSKSFQVGGCKWQIHVHRIEKAKGMEYLSLYLKVGGSVPSFGWSKYAYFSLALINHMDPQKSVVRETQQKFNAGYRSWGSSFVALNDFYDPKQGYLLNNVCIIEVRISVSDVAFDTNIFNINNNVSSSTHHSNNQTSNETLSRSTSTTTQEDDVNGITTLQPNSDDVVHYVPTAPPLLYPTIICDDEPLVVPLNTTTLSEILDVKSLGEEEKAYVPLLEEVCSWHPSLIQSQMRKSPKFIQWAFIALGQVLHFLKTTKAKDMDENAFNKLQCLWEELQLFGFELSWLEPHIEMKMLKAKMAVTEIDLELAKRDLAMAEVQMGFEEKDMDKELGYGYGYGYVIS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03603 371 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 142 IPR008974 GO:0005515
Aip06g03603 371 Coils Coil 321 341 - -
Aip06g03603 371 ProSiteProfiles MATH/TRAF domain profile. 10 135 IPR002083 GO:0005515
Aip06g03603 371 Pfam MATH domain 19 137 IPR002083 GO:0005515
Aip06g03603 371 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 341 - -
Aip06g03603 371 SUPERFAMILY TRAF domain-like 12 140 - -
Aip06g03603 371 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 341 - -
Aip06g03603 371 MobiDBLite consensus disorder prediction 153 185 - -
Aip06g03603 371 CDD MATH 12 135 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03603 Aip-Chr6 133434740 133438055 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03603 - - ahf:112695910 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03603 06 133434740 133438055 Aip06g03603 06 133434740 133438055 ECH
Aip06g03603 06 133434740 133438055 Aip07g00636 07 6058003 6070838 ECH