Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03597 ATGAAATTCGGGTGCTTGTTCACGGAGTATCTGCAGGAAGAGAGGGAGTTGTTGGATGAGAAATGCGCGCACATTGAATATGTGAGGTTGAAGAAAGTTCTCAAGAGCTGCCAGACCTGCAAACCATTGCACTCTTCTTCTTCTTCTTCTTCTCCTTCCCTTGTTTCTGATCTTCCTAACCATCAATTGTGCCAATGTCAATCCTGCCCAGTGTGTGATCAGAAGTTCTTCTCGGAGCTGATGAAGGAAGCATCAGATATAGTAGGGTTCTTCGGTTCAAGGGTTAAGCATCTTCTTGATCTTCATGTTGCGTCTGGAATGCAGAGATATGTATTGCGCCTACGACAGTGCTTTAAAAATGATAGGCAAGCCCTCGCACAAGAAGGGAGAATTTTAATTGAGTACATTGCAATGAATGCTATTGCCATGAGGAAAATACTTAAGAAATATGATAAAGTTCACAGCTCTGTGAATGGAAAGAATTTCAAATCTAAGATGCACACTGAGCACATTGAACTTTTACACACACCTTGGCTAATTGAATTGGGTGCTTTTTATCTGAATTCTAGTGGACGAGATTGTTGTGAACTCAATGGAGTGTATGGTCACTTTAAGTGTGATCTAAATGTTAGTGACGCTGTAATGACGTTGATTCTTCCAGATTCTATCAAGCTCGAGTATAATCTAACTTGCGCAATATGTCTGGATTTGGTTTTCAACCCCTATGCTTTGGGTTGTGGTCATATCTTCTGCAAGTCATGTGCCTGTTCAGCTGCCTCTGTGATGATGTTCCAAGGCCTTAAAGCTGCAAGTCCTGAGTCTAAGTGTCCCATATGCAGAGAGGATGGAGTTTATCCTAAGAAAGTACGCATGTTAGAACTTGGTCTACTAATGAAAAGAAGGTACAATGATTACTGGAAAGAGAGGCTACTTAGCGAACGAAACAACATGGTGAAGCAATCCAAAGAATACTGGAATATGCAGTCTGCATATGCACTTGGATTACACTAG 1011 0.4135 MKFGCLFTEYLQEERELLDEKCAHIEYVRLKKVLKSCQTCKPLHSSSSSSSPSLVSDLPNHQLCQCQSCPVCDQKFFSELMKEASDIVGFFGSRVKHLLDLHVASGMQRYVLRLRQCFKNDRQALAQEGRILIEYIAMNAIAMRKILKKYDKVHSSVNGKNFKSKMHTEHIELLHTPWLIELGAFYLNSSGRDCCELNGVYGHFKCDLNVSDAVMTLILPDSIKLEYNLTCAICLDLVFNPYALGCGHIFCKSCACSAASVMMFQGLKAASPESKCPICREDGVYPKKVRMLELGLLMKRRYNDYWKERLLSERNNMVKQSKEYWNMQSAYALGLH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03597 336 ProSiteProfiles SPX domain profile. 1 164 IPR004331 -
Aip06g03597 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 333 - -
Aip06g03597 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 331 IPR013083 -
Aip06g03597 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 333 IPR033326 -
Aip06g03597 336 SMART ring_2 231 279 IPR001841 -
Aip06g03597 336 ProSitePatterns Zinc finger RING-type signature. 246 255 IPR017907 -
Aip06g03597 336 CDD SPX_BAH1-like 2 160 - -
Aip06g03597 336 ProSiteProfiles Zinc finger RING-type profile. 231 280 IPR001841 -
Aip06g03597 336 SUPERFAMILY RING/U-box 223 282 - -
Aip06g03597 336 Pfam RING-type zinc-finger 231 277 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03597 Aip-Chr6 133392850 133395872 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03597 K16275 - gmx:100781704 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03597 06 133392850 133395872 Aip06g03597 06 133392850 133395872 ECH