Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03596 ATGTCAAATTTCTCGTCGTGGTTCTCTCGCTTGCGCTCTTCTTCCAACTACTTCTATCGCACTATCCATAATATAACAACTCACTCGAATGCAACCAATGTGCTGACCTCACACCGTCCAAGGATGACGTGGACAGGTTCCGTGCTTCCTCTTGCGGTGGCTGTATGCGGTGCTTCATTTGCGCTTCATCCGCACTTCAATCCTTCCTTGTGTGACGCCTCTGTTCCCTCTGATGCCATTAACAACAGCTTTGGGGGCAAAGGTAGCACCCAGTATGCCGTTAAGGGATCACACAAAGAATTTCCGCAGGAGCTTCTCCACGAATTGAAACTCATCTGTCAGGATAACTTATCACTTGATTATGATGAAAGATACCACCATGGAAAACCACAAAACAGCTTTCATAAGGCTGTTAATATCCCAGATGTTATCGTTTATCCAAGATCTGAAGAAGAAGTTTCCAAGATTGTAAAATCATGTAACGACTATAAGGTTCCTATTGTACCTTATGGTGGAGCTACATCAATTGAGGGTCACACCTTATCGCCTCACGGAGGGGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAGGCATTACATGTTGATGACATGGATGTCATTGTTGAGCCTGGAATTGGATGGATGGAACTTAATGAGTATTTGGAACCTTATGGTCTATTTTTTCCACTTGATCCAGGTCCTGGTGCAAGCATTGGAGGCATGTGTGCTACACGCTGCTCTGGGTCTTTAGCTGTGAGATATGGAACTATGCGTGATAATGTGATCAGTCTCAAGGTAGTTCTTGCCAATGGAGATATTGTGAAGACTGCATCTCGTGCTAGAAAGAGTGCTGCAGGGTATGACCTGACCCGTTTGGTGATTGGAAGTGAAGGAACACTTGGTGTTGTTACAGAAGTAACACTAAGACTTCAGAAAATTCCCCAGCATTCAGTGGTTGCCATGTGCAATTTCCCTTCTGTTAAGGATGCAGCAGATGTTGCTATTGCCACTATGATGTCTGGTATACAGGTGTCAAGAGTTGAGTTATTGGATGAAGTTCAGGTGAAAGCCATCAATGTTGCTAATGGGAAGAATTTCCCTGAATGTCCAACGTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAGCAAACACAAATTGTTCGGGGAATTGTTTCTAAGCACAATGGATCGGACTTTGTATTCGCGGAAGAACCTGAAGCTAAAAAAGAACTTTGGAAGGTAAGGAAGGAGGCACTTTGGGCTTGTTTTGCAATGGAACCTAATATGGAGGCAATGATTTCGGATGTATGTGTTCCCTTATCTCACCTTGCTGATTTAATTTCAAGGTCTAAAAAGGAGTTGGATGCATCACCACTGGTTTGCACGGTAATTGCTCATGCTGGGGACGGTAATTTCCACACGGTAATTCTCTTTGACCCTAGCCGAGAAGAACATCGGAAGGAGGCAGAGAGACTCAACAGCTTTATGGTTCATGCTGCTTTGTCATTGGAAGGAACTTGTACCGGTGAACATGGTGTTGGAACTGGGAAAATGAAGTACCTTGAAGAAGAACTGGGAGTGGAAGCATTAAGGACAATGAAGAAAATAAAACAAGTGTTAGATCCCAACAATATCATGAATCCCGGAAAGCTCATCCCTCCCCATGTTTGCTTGTAA 1689 0.4346 MSNFSSWFSRLRSSSNYFYRTIHNITTHSNATNVLTSHRPRMTWTGSVLPLAVAVCGASFALHPHFNPSLCDASVPSDAINNSFGGKGSTQYAVKGSHKEFPQELLHELKLICQDNLSLDYDERYHHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNDYKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKRVKALHVDDMDVIVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVVTEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMMSGIQVSRVELLDEVQVKAINVANGKNFPECPTLMFEFIGTEAYAREQTQIVRGIVSKHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNMEAMISDVCVPLSHLADLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSREEHRKEAERLNSFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKQVLDPNNIMNPGKLIPPHVCL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03596 562 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 79 558 - -
Aip06g03596 562 ProSiteProfiles PCMH-type FAD-binding domain profile. 137 314 IPR016166 GO:0071949
Aip06g03596 562 Gene3D - 516 556 IPR016171 -
Aip06g03596 562 Pfam FAD binding domain 141 277 IPR006094 GO:0050660
Aip06g03596 562 Gene3D - 434 515 - -
Aip06g03596 562 SUPERFAMILY FAD-linked oxidases, C-terminal domain 318 558 IPR016164 GO:0003824|GO:0050660
Aip06g03596 562 PANTHER D-LACTATE DEHYDROGENASE 79 558 - -
Aip06g03596 562 Gene3D - 100 334 IPR016169 -
Aip06g03596 562 SUPERFAMILY FAD-binding/transporter-associated domain-like 108 315 IPR036318 GO:0050660
Aip06g03596 562 Pfam FAD linked oxidases, C-terminal domain 314 555 IPR004113 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03596 Aip-Chr6 133380357 133392579 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03596 K00102 - gmx:100803612 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03596 06 133380357 133392579 Aip06g03596 06 133380357 133392579 ECH