Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03573 ATGGCTGATGATTATGATTCCCCTAATATAGGGGACACAATATGTAAGGTTTTGATGCCATTCATGGCTATGATTGAAGTCTTCATGATTGCTGTCGCTAATTGTTTCAACTATCAATCAAGATGTGTTGCTAAAAATCACAAACCTTACTACAATTATGAGGATCTCGCTCGCCTTGCTCAAGAAACCAGATTTACTATTAATGAAGTGGAGGCATTGTATGTGCTGTTTAAGAGGTTAAGTAGCTCCATAATTGATGATGGTTTCATTCACAAGGAGGAACTTCAATTGGCTTTATTCCAAACAACTAATGGAGAATATCTTTTCCTAGATCGAGTATTTGACCTTTTTGACGAGAAAAGCAACGGTGTTATCGAGTTTGACGAATTTGTCCACACGCTCAGTATTTTCCATCCTTATGCTCCTCTAGAAGAAAAAATTGATTATGCATTTAAGCTTTATGATATACGGAAAAGTGGATTTATCGAGCGAGAGGAACTGAAGCAAATGGTGAAAGCCATGTTGATGGAATCTGATATGAACCTTTCCGACGATCTTCTTGAAGCTATTGTTGACAAGACAATTGCTGATGCCGATAAGGATAGGGATGGTAAAATCAGTAAAGAAGATTGGAAAGTTTTTGTGAGTAGAAATCCATCCATATTGAAGAACATGACACTTCCTTATTTGAAGGACATCACATGTATATTTCCAAGTTTTATTTTCAAATCAGAGGCTGAAATTTGA 747 0.3641 MADDYDSPNIGDTICKVLMPFMAMIEVFMIAVANCFNYQSRCVAKNHKPYYNYEDLARLAQETRFTINEVEALYVLFKRLSSSIIDDGFIHKEELQLALFQTTNGEYLFLDRVFDLFDEKSNGVIEFDEFVHTLSIFHPYAPLEEKIDYAFKLYDIRKSGFIEREELKQMVKAMLMESDMNLSDDLLEAIVDKTIADADKDRDGKISKEDWKVFVSRNPSILKNMTLPYLKDITCIFPSFIFKSEAEI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03573 248 PRINTS Recoverin family signature 51 65 - -
Aip06g03573 248 PRINTS Recoverin family signature 113 134 - -
Aip06g03573 248 PRINTS Recoverin family signature 160 178 - -
Aip06g03573 248 PRINTS Recoverin family signature 206 226 - -
Aip06g03573 248 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
Aip06g03573 248 PANTHER CALCINEURIN B 6 247 IPR045198 GO:0005509|GO:0019722|GO:0019900
Aip06g03573 248 CDD EFh 110 172 IPR002048 GO:0005509
Aip06g03573 248 PANTHER CALCINEURIN B-LIKE PROTEIN 10 6 247 - -
Aip06g03573 248 SMART efh_1 146 174 IPR002048 GO:0005509
Aip06g03573 248 SMART efh_1 109 137 IPR002048 GO:0005509
Aip06g03573 248 SMART efh_1 190 218 IPR002048 GO:0005509
Aip06g03573 248 Gene3D - 55 248 - -
Aip06g03573 248 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Aip06g03573 248 CDD EFh 146 216 IPR002048 GO:0005509
Aip06g03573 248 Pfam EF-hand domain pair 144 210 IPR002048 GO:0005509
Aip06g03573 248 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Aip06g03573 248 SUPERFAMILY EF-hand 56 240 IPR011992 -
Aip06g03573 248 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03573 Aip-Chr6 133204059 133210040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03573 59 247 EF-hand Containing Proteins AT4G26570 60.104 1.79e-83 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03573 K06268 - nnu:104586607 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03573 06 133204059 133210040 Aip06g03573 06 133204059 133210040 ECH