Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03558 ATGTTTGAGGAATCATTGTCATCATCAACATCCTCCCTCACCAGTTGGTTCACCCCAACCATGTTTTTCCTCCTTCTCCAACTTGTTATTGCCACCATTTACATCATCTCCTCTCTCACCAACAACAATGCCAAGCATCATGAACATCATGAACCACAACAACCACTTGCAAGATCCCCTTCTCTCTTGCATAGACTCAAATCCCTAAACTTTTATAACTACCACGAACAACAACCACAACAACAACTTCCACATGAAATCAATAACTACTTATTCCAACAACAACCACTTGCTACATCTCCTTCTCTATTGCAAAGGCTTAAATCCATTAATTTTTACTCTAACCACCCTCATCACACTTCCCAAGAACCTCAACAAACTCAACAACTTCCCAGATCTCCCTCCTCAGTCATCCAACGCCTCAAATCCATTAACCTTCAAACTTATTTCCCAACTGAAACTTTATCTTCCTATTTTACCCCTGAACAACCAAAGAAAAAAACGCACGTGCCGAAAATACCAAAAGTGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATATGACGATGGAGATGTAGTTGGAGAAATAATGTTCCGCAATAACAACAATCATGACGTGGATGAGGATTCTTGCGCTTCCATGGACGAGATTTTCAGCAAGCTGCAGCAAGGGCAAACTGGTAATTTCACAAGAACGCATTCCGACACTAAACCGGCCTCCGGCGAGGTTCCGGTTAAGCTTCCGAGGAAGATGAAGAAGTCGGCGAGCACCAAATCGGCGTTCTCGCACTTCGAGGAGGTCGACATTGTGGAAACCCGCCGTCCGGCCACCGCGAGGGAGAGTGGCGCCGCCGCAGAAGAAGGCGGAGGTGACGGCGGCGTTGACGCAAAGGCGGACGACTTCATTAACCGGTTCAAGCAGCAGCTGAAGCTTCAGAGGCTGGATTCAATAATGAGGTATAAGGAGATGATTGGCAGAGGGACTGCCAAGTAA 999 0.4565 MFEESLSSSTSSLTSWFTPTMFFLLLQLVIATIYIISSLTNNNAKHHEHHEPQQPLARSPSLLHRLKSLNFYNYHEQQPQQQLPHEINNYLFQQQPLATSPSLLQRLKSINFYSNHPHHTSQEPQQTQQLPRSPSSVIQRLKSINLQTYFPTETLSSYFTPEQPKKKTHVPKIPKVKKEEEEEEEEEEYDDGDVVGEIMFRNNNNHDVDEDSCASMDEIFSKLQQGQTGNFTRTHSDTKPASGEVPVKLPRKMKKSASTKSAFSHFEEVDIVETRRPATARESGAAAEEGGGDGGVDAKADDFINRFKQQLKLQRLDSIMRYKEMIGRGTAK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03558 332 MobiDBLite consensus disorder prediction 275 297 - -
Aip06g03558 332 MobiDBLite consensus disorder prediction 165 179 - -
Aip06g03558 332 MobiDBLite consensus disorder prediction 161 191 - -
Aip06g03558 332 Pfam Cotton fibre expressed protein 294 327 IPR008480 -
Aip06g03558 332 PANTHER OS06G0566500 PROTEIN 119 330 - -
Aip06g03558 332 PANTHER OS06G0566500 PROTEIN 80 116 - -
Aip06g03558 332 PANTHER OS06G0566500 PROTEIN 1 79 - -
Aip06g03558 332 MobiDBLite consensus disorder prediction 114 135 - -
Aip06g03558 332 PANTHER COTTON FIBER (DUF761) 119 330 - -
Aip06g03558 332 PANTHER COTTON FIBER (DUF761) 1 79 - -
Aip06g03558 332 PANTHER COTTON FIBER (DUF761) 80 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03558 Aip-Chr6 133074312 133075644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03558 - - adu:107495638 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03558 06 133074312 133075644 Aip06g03558 06 133074312 133075644 ECH