Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03557 ATGGCGGAACCACAATCAACAAACTACATTTCACGAGAAGAACTCAGCAAGCACAACAAACCCCAAGATCTATGGATCTCCATTCACGGCAAAGTCTACAACGTCACCAACTGGCTCCAATACCATCCAGGTGGCGCCTCCCCATTGCTCAACCTCGCCGGTCAAGACGTAACCGATGCATTCCTCGCTTTCCACCCCAACCACGCCTTCAACCGCCTCCAACCTTTCTTCACCGGCTCCTACCTCGCCAACCACAACGTCTCCGAAGCTTCCAGAGACTACCGAAACCTCCTCTCCACCTTCACAAGAATGGGCCTCTTCGACCATAACCGCGGCGTTCTCACTTCTCTCGTCTTCATTTTCATTATGTTCTGTTTATGCGTTTACGCGGTTCTCTTCGCCCAGACCGGCCTGGTTCGCGTTGGCTCCGGCGCTTTGATGGGATTTTTATGGATTCAGAGCGGTTGGATTGGTCATGACTCCGGTCATTACAAGATTGTTAGTTCCAAGAAACTCAACCGGGTTCTTCAAATTCTTTCCGGTAATGTTCTGGCCGGAATTAGCATTGGTTGGTGGAAATGGAACCACAATGCGCATCACATTGCTGTTAACAGCCTCGATTTCGATCCCGATCTTCAACACCTTCCGTTCTTCGTCGTCTCTTCGAGGTTCTTCAATTCACTCTTTTCTTGCTTCTACGAGAGGATCATGAAATTCGATTCGTTTTCTAGGTTATTGGTTAGTTATCAGCATTGGACATTTTACCCTGTTATGTGCTTCGCTAGGCTCAATTTGTTTGCGCAATCTTTCATGTTGTTGTCTTCGAATCGGAAGGTTCCTGATAGAGGAACTGAGATTTTAGGGCTAATTGCTTTCTGGATTTGGTACCCTTGCTTGGTTTCTTGTTTGCCTAATTGGGGGGAAAGGATTTTGTTTGTGTTAGCAAGCTTTTCTGTTACTGGAATTCAGCATGTTCAATTCTGTTTGAACCATTTCTCTGCCAAAGTTTATGTTGGTCCTCCAACCGCAACGGATTGGTGTGAGAAGCAGTGTAATGGTACTCTTGATGTGAGTTGTTCTTCTTGGATGGATTGGTTCCATGGAGGTTTGCAGTTTCAGGTTGAGCATCACTTGTTTCCGAGGCTGCCTCGGTGCCATCTTCGGAAGATTTCTCCCTTTGTTAAGGATCTTTGCAAGAAGCATAATCTTCCTTACAATTGCGTGTCCTTCTGGAAGGCAAATGCTCTCACGATTCGGACGCTGAGGGACGCTGCGCTGCAGGCTCGCGACGTTTCTAATCCTGTTCCAAAGAATCTTGTTTGGGAAGCTGTTAACACTCATGGATGA 1347 0.4699 MAEPQSTNYISREELSKHNKPQDLWISIHGKVYNVTNWLQYHPGGASPLLNLAGQDVTDAFLAFHPNHAFNRLQPFFTGSYLANHNVSEASRDYRNLLSTFTRMGLFDHNRGVLTSLVFIFIMFCLCVYAVLFAQTGLVRVGSGALMGFLWIQSGWIGHDSGHYKIVSSKKLNRVLQILSGNVLAGISIGWWKWNHNAHHIAVNSLDFDPDLQHLPFFVVSSRFFNSLFSCFYERIMKFDSFSRLLVSYQHWTFYPVMCFARLNLFAQSFMLLSSNRKVPDRGTEILGLIAFWIWYPCLVSCLPNWGERILFVLASFSVTGIQHVQFCLNHFSAKVYVGPPTATDWCEKQCNGTLDVSCSSWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPFVKDLCKKHNLPYNCVSFWKANALTIRTLRDAALQARDVSNPVPKNLVWEAVNTHG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03557 448 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 6 447 - -
Aip06g03557 448 CDD Delta6-FADS-like 141 403 - -
Aip06g03557 448 SMART Cyt_b5_2 10 82 IPR001199 -
Aip06g03557 448 PANTHER FATTY ACID DESATURASE 2 6 447 IPR012171 GO:0016491
Aip06g03557 448 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 79 IPR001199 -
Aip06g03557 448 PIRSF FA_sphingolip_des 1 435 IPR012171 GO:0016491
Aip06g03557 448 Gene3D - 1 81 IPR036400 -
Aip06g03557 448 Pfam Fatty acid desaturase 144 407 IPR005804 GO:0006629
Aip06g03557 448 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 83 IPR036400 -
Aip06g03557 448 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 7 82 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03557 Aip-Chr6 133048113 133049916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03557 1 448 Lipid Metabolism Gene Families AT2G46210 60.579 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03557 K21737 - mnt:21402436 706.057