Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03552 ATGGAGCCCAATTCATCAGAGAATGCATCCTCAAATATCATCAGTAATGGCATCAAGAACAACAAAATGATACATGAAAATCATCTATATAGAACTTCCTACCATTTTCAGCCCCAACAAAATTGGATGAACGATCCAAATGGACCAATGTACTACAAAGGAGTTTACCATTTGTTTTACCAATATAACCCTGATGGAGCAACCTTTGGTAAGAAAATGGTATGGGGTCACTCAGTATCCTATGATCTAATCAATTGGATTCACCTCAATCATCCTTCTCTTCAACCATCTCATCACTATGACATTCATGGCTGCTTCTCTGGCTCAACCACAATAATCCCCTCCAATAATCAACCCTTTATTTTCTACACAGGATTTGATGAAACAAAACACCAAGTTCAAAACTTAGCTATGCCAAAAAATCCACAAGACCCTTTTCTAAGGGAGTGGATCAAACACCCTCAAAACCCTATAATCACTGCCCCAATTGGATTAGTTGAACAAGAAAATTTTAGAGACCCAACAACAGCTTGGAAGGGTAGTGATGGAAAATGGAGGGTCATAGTTGGTGCTAGAAATGGTGATATTGGGAAGGCAATTTTATATCATAGTGATGATTTTGTTAATTGGAAATTAAGCCCTAATAATCATGAATTCTATGTAATTGATGGCATTGGAATGTGTGAGTGCCCTGATTTTTTTCCAGTTTTAATTGATGGTACAAAACATGGGGTTGATTTAGATTATTCTTCAGTTCAAGATTCTAATGATGTTATTAGGCATGTGTTGAAGATAAGTTACCAAAATAAACAGCAAGAATATTATTTGGTAGGTAAGTATGTTTGTGATGAGGACAAGTTTGTTGCTGAGAATAAAATTACAGGGACTAGTTTGGACTTGAAATTGGACCATGGTGAATTTTATGCTTCAAAGTCATTCTTTGACTATGCCAAGAAGAGAAGGGTATTATGGGGATGGGTTAAAGAGCTTGATACAGAACAAGATGATATTCTTAAAGGATGGGCTGGTCTACAGGCTATTCCAAGGCAAGTGTGGCTTCATGAAAATGGGAAGTGGCTGATGCAGTGGCCAATAGAAAAGTTAGAGACACTTAGAGACTCCGACAATCAAGTTAGTATTTTCGCACACAAACTTGTTTTTGGATCAACTCTTCAAGTCTCAGGTATCACTGCATCACAGGCTGATGTAGAAGTAGTGTTTGAACTACCTGAACTGGAAAGTGCTGAGTGGTTAGATTCCAAAGAAGTTGATCCCCAAATAGTGTGTAGTGATAAAGAATATGCATCAAGAAGTGGCATAATAGGCCCATTTGGTTTGTTGGCTTTAGCTTCAAAGGATCTTACAGAGCAAACTGCAATTTTCTTCACAATCTTTAGAACTCCCAATGGATTTTCATGTCTCATGTGCACTGATCTTACCAGGTCTTCATTGAGGCAAGACGTTCATAAAACCACATATGCAACTATCTTTGCCATAGATTCCAATCTCAAAGCAATTTCACTTAGAACCTTGATTGATGGGTCGATTATAGAGAGTTTTGGAGAGAAAGGAAGAGTTTGTATCACAAACAGAGTTTATCCCTTGTTGGCTACTGAAAAAGATGCTCATCTTTATGTCTTTAACAATGGAAAACAGAATGTTTGCATCTCAAAACTAAATGCTTGGAGCATGAAGCGAGCAAAGTTTGTTCAACAGTGA 1719 0.3752 MEPNSSENASSNIISNGIKNNKMIHENHLYRTSYHFQPQQNWMNDPNGPMYYKGVYHLFYQYNPDGATFGKKMVWGHSVSYDLINWIHLNHPSLQPSHHYDIHGCFSGSTTIIPSNNQPFIFYTGFDETKHQVQNLAMPKNPQDPFLREWIKHPQNPIITAPIGLVEQENFRDPTTAWKGSDGKWRVIVGARNGDIGKAILYHSDDFVNWKLSPNNHEFYVIDGIGMCECPDFFPVLIDGTKHGVDLDYSSVQDSNDVIRHVLKISYQNKQQEYYLVGKYVCDEDKFVAENKITGTSLDLKLDHGEFYASKSFFDYAKKRRVLWGWVKELDTEQDDILKGWAGLQAIPRQVWLHENGKWLMQWPIEKLETLRDSDNQVSIFAHKLVFGSTLQVSGITASQADVEVVFELPELESAEWLDSKEVDPQIVCSDKEYASRSGIIGPFGLLALASKDLTEQTAIFFTIFRTPNGFSCLMCTDLTRSSLRQDVHKTTYATIFAIDSNLKAISLRTLIDGSIIESFGEKGRVCITNRVYPLLATEKDAHLYVFNNGKQNVCISKLNAWSMKRAKFVQQ 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03552 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 23 571 - -
Aip06g03552 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 23 571 - -
Aip06g03552 572 SUPERFAMILY Arabinanase/levansucrase/invertase 26 365 IPR023296 -
Aip06g03552 572 Gene3D - 377 564 - -
Aip06g03552 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 35 364 IPR013148 -
Aip06g03552 572 CDD GH32_Fruct1-like 41 353 - -
Aip06g03552 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 364 566 IPR013320 -
Aip06g03552 572 Pfam Glycosyl hydrolases family 32 C terminal 368 563 IPR013189 -
Aip06g03552 572 ProSitePatterns Glycosyl hydrolases family 32 active site. 35 48 IPR018053 GO:0004553|GO:0005975
Aip06g03552 572 SMART glyco_32 35 524 IPR001362 GO:0004553|GO:0005975
Aip06g03552 572 Gene3D Glycosyl hydrolase domain; family 43 40 376 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03552 Aip-Chr6 132988482 132993548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03552 45 569 Glycoside Hydrolase AT1G55120 50.467 5.67e-180 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03552 - K01193 ahf:112697659 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03552 06 132988482 132993548 Aip06g03552 06 132988482 132993548 ECH