Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03550 ATGTTCTCCTTCACAATATTCATGATGAAGAACTTTGCAACACTAATGTTACTTGCATTGTTTCTTTTTATCCTGCAAAATGGAAACAGAATTGAAGCATTCCCAGATAACATTATTAGTTCTTCTTCTATTAATCAACCATATCGAACTTCTTATCACTTTCAGCCACCAAAAAATTGGATGAACGATCCAAATGCACCAATGTACTATAAAGGTGTTTACCACCTTTTCTACCAGCATAATCCTTATGCAGCAACCTTTGGGGACAGAATTGTATGGGCTCACTCTGTGTCCTATGATCTCATCAATTGGATTCATCTAAACAATGCTATCGAACCGAGCGAGCCTTTCGACATCAATAGCTGCTGGTCAGGTTCAGCCACCATACTCGAAGGAGGCGAAAAGCCTTTTATTTTGTACACAGGTATTGATGAAAACAAACACCAAGTTCAAAACTTGGCTATTCCAAAGAATGCATCAGATCCTTTCTTAAGGGAATGGATCAAACTCCCTCAAAACCCTGTGATGAAACCACCAATTGGTGTTGAGTTGAACAATTTTAGAGACCCTTCAACTGCTTGGCTTGGAAATGATGGAAAATGGAGGGTAGTTATTGGTGCTCAAAATGGTGATCAAGGGAAGGTTATTTTGTACCATAGTAAGGATTTTGTTGATTGGAAAGTGGATTCTAGGCCGTTTTTCGCGACGGATAACACCGGAGTTTGCGAGTGTCCGGACTTCTTTCCGGTGTTGATCAAAGGCGAAAATGGAGTAGATACATCTTTTGATCATCAAGATCCTAATTTTGTTAGGCATGTAATGAAGATAAGTTATCTTAGTAGGTTACATGACTATTATTTTCTTGGAAACTATAATGTCTTTGGTGACAATGAAAATTTTGTTCCTGATGTTAAATTCACAGGAACAAGTTCAGATTTAAGGTATGATTATGGTAAATTTTATGCTTCCAAATCATTTTTTGATTATGCTAAGAACAGGAGAATATTGTGGGGATGGGTGAATGAATCTGATTCTACACAAGATGATATTCAAAAAGGATGGGCTGGTATACAGTCAATTCCAAGGCAAATTTGGCTTGATAAAAGTGGGAAGAGATTGGTGCAATGGCCAATTGAAGAGGTTGAAAAATTACATGATAAACAAGTTAGCATTACTAAAGAAAACCTCCTTAGTGGATCAACTCTTCAAGTCTCCGGCATCGTTGCATCACAGGTTGATGTAGAAGTGGTATTTGAAATATCCGAAGTAGAAAGTGCAGAATGGTTAGATCCAAAGGGTGTTGATCCACAAATACTATGTAGCAAAAAAGAAGATGGATCAAGAAGTGGCATAATTGGACCATTTGGTTTGTTAGCTTTGGCTTCAGAGGATCTCCGAGAGCAAACTTCAGTGTTCTTTCAAATCTATAAAGCTCCAAATAGATATGTAGGCCTAATGTGTAGTGATCAAAGCagGTCTTCATTAAGAGATGACATTGATAAAACTACATATGGAACTTTCTTTGACATAGATCCTACTCAAAAAACAATTTCTCTTAGAACTTTGATTGACCACTCTATTGTTGAAAGTTTTGGAGATGAAGGGAGAATTTGTATCACCAGTAGGGTTTATCCTTCTTTGGCTATAGATAAAAATGCTCATCTTTTTGTATTTAATAATGGGATTCAAACTATACAAATTTCAAAATTAAATGCTTGGAGCATGAAGCAAGCACAAATTGGCTATGAGGGCAATATAAGTTGTGTTTGA 1770 0.3672 MFSFTIFMMKNFATLMLLALFLFILQNGNRIEAFPDNIISSSSINQPYRTSYHFQPPKNWMNDPNAPMYYKGVYHLFYQHNPYAATFGDRIVWAHSVSYDLINWIHLNNAIEPSEPFDINSCWSGSATILEGGEKPFILYTGIDENKHQVQNLAIPKNASDPFLREWIKLPQNPVMKPPIGVELNNFRDPSTAWLGNDGKWRVVIGAQNGDQGKVILYHSKDFVDWKVDSRPFFATDNTGVCECPDFFPVLIKGENGVDTSFDHQDPNFVRHVMKISYLSRLHDYYFLGNYNVFGDNENFVPDVKFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIQKGWAGIQSIPRQIWLDKSGKRLVQWPIEEVEKLHDKQVSITKENLLSGSTLQVSGIVASQVDVEVVFEISEVESAEWLDPKGVDPQILCSKKEDGSRSGIIGPFGLLALASEDLREQTSVFFQIYKAPNRYVGLMCSDQSRSSLRDDIDKTTYGTFFDIDPTQKTISLRTLIDHSIVESFGDEGRICITSRVYPSLAIDKNAHLFVFNNGIQTIQISKLNAWSMKQAQIGYEGNISCV 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03550 589 Gene3D Glycosyl hydrolase domain; family 43 57 388 IPR023296 -
Aip06g03550 589 SMART glyco_32 53 535 IPR001362 GO:0004553|GO:0005975
Aip06g03550 589 SUPERFAMILY Arabinanase/levansucrase/invertase 44 378 IPR023296 -
Aip06g03550 589 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 43 582 - -
Aip06g03550 589 Pfam Glycosyl hydrolases family 32 N-terminal domain 53 377 IPR013148 -
Aip06g03550 589 Pfam Glycosyl hydrolases family 32 C terminal 380 574 IPR013189 -
Aip06g03550 589 Gene3D - 389 575 - -
Aip06g03550 589 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 43 582 - -
Aip06g03550 589 ProSitePatterns Glycosyl hydrolases family 32 active site. 53 66 IPR018053 GO:0004553|GO:0005975
Aip06g03550 589 SUPERFAMILY Concanavalin A-like lectins/glucanases 377 577 IPR013320 -
Aip06g03550 589 CDD GH32_Fruct1-like 59 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03550 Aip-Chr6 132973289 132977640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03550 58 580 Glycoside Hydrolase AT1G55120 56.955 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03550 K01193 - gmx:100777487 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03550 06 132973289 132977640 Aip06g03550 06 132973289 132977640 ECH