Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03548 ATGCAGGGGCTACGGCGGTGCTCAAACGACGTCGTTCAGCTGGACCTATCCACTACAGTGACGACCACAAACACATCATCAACCTCACTCTCCATCGACGTTGAGGAATCAGTGGAGACCAAGATCCAACGGCTCATAACAGAGCACCCAGTCATCATATTCACACGATCTTCTTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCTACCATCGGAGTTAACCCAACCGTCATCGAATTGGACGACCACGAGATCGCCGCCCTCCCTTCCTCCTCCGAAGACGGACCTGGTGCCGCCTCCAATCTCCGGAACCGCACCCCCGCCGTCTTCATAGGTGGCGCCTGTGTTGGTGGTCTCGAGTCCCTCGTGGCTCTCCACGTCAGCGGTCACCTTGTTCCTAAGCTCGTTCAAGTCGGTGCTCTCTGGGTATGA 435 0.5632 MQGLRRCSNDVVQLDLSTTVTTTNTSSTSLSIDVEESVETKIQRLITEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPSSSEDGPGAASNLRNRTPAVFIGGACVGGLESLVALHVSGHLVPKLVQVGALWV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03548 144 PANTHER GLUTAREDOXIN-C6 5 143 - -
Aip06g03548 144 SUPERFAMILY Thioredoxin-like 40 143 IPR036249 -
Aip06g03548 144 PANTHER GLUTAREDOXIN 5 143 IPR011905 -
Aip06g03548 144 TIGRFAM GlrX-like_plant: glutaredoxin-like family 42 144 IPR011905 -
Aip06g03548 144 ProSiteProfiles Glutaredoxin domain profile. 39 143 - -
Aip06g03548 144 PRINTS Glutaredoxin signature 51 69 IPR014025 -
Aip06g03548 144 PRINTS Glutaredoxin signature 100 113 IPR014025 -
Aip06g03548 144 PRINTS Glutaredoxin signature 114 127 IPR014025 -
Aip06g03548 144 Gene3D Glutaredoxin 32 143 - -
Aip06g03548 144 CDD GRX_GRXh_1_2_like 50 135 - -
Aip06g03548 144 Pfam Glutaredoxin 51 116 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03548 Aip-Chr6 132950865 132951464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03548 42 144 Miscellaneous Gene Families AT4G15690 40.777 3.35e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03548 - - adu:107495514 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03548 06 132950865 132951464 Aip07g03427 07 124089531 124090629 PCT