Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03543 ATGTGGGAATCCATTGTGTTAACGGTGGCTGCCACCGCCGGAAACAACATCGGAAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTGAAGCTCAAGGTGATAAGGGCTTATGCATTTAACAAAATCTGGGTTATAGGTTTTCTGATGGATATAGGTGGTGCATTATTGATGTTAAGAGCATTATCTTTGGCCCCGGTATCTGTGATCCAACCGGTTTCGGGAGTCGGACTAGCAATTCTTTCAATCTTCTCTCATTTTTATCTGAAGGAAATCATGAATGCTGTTGATTGGGTTGGCATTGCCTTGGCAGGTGTTGGCACAATAGGAGTTGGTGCCGGAGGTGAAGAGCAAGAGGCGGCTACTCTGTCCATTTTTCACATACCATGTCTGGCATTTGTTGTTGCCATCTTGTTTGTATTGCTTAATGGAGGGCTTAGAATATGCAGGCGTCATCGAAGAGAACAAGAGATGATGGAATACGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGTCTTCGGTAATTTCGAAGATGGGATTTCTGTTCCTAGAGCAAGGTTTTCACCAACTGTTGGTTCCTCTGTGCATCATATTCAGTGTGTGTTGTAGTGGAACAGGGTTTTACTACCAGACACGGGGACTAAAGCACGGTAGGGCTATTGTGGTTTCTACATGTGCAGCCGTGGCATCAATTGTGAGCGGTGTACTAGCTGGAATGCTTGCATTGGGTGAAAGACTGCCTTCTGCCCCGAAAGCTCGCTTGGCACTTCTTCTTGGATGGCTACTTATAATCACGGGTGTAATTTTACTCGTTGGTTCGACGCGGCTAGTGAAATTTCTCTCGTGTTCTTCAGGACGCACAAAAAGAAGCAATGCTGATAAGAGTTACAGCGCTAGGAGACCAAGTTCTTTGCGTATAAGGGAACCGAATCCAAGCGCCGTGATACCAGCCACGACGTTAAATCATCTGCTACCATCGGCTTCCAAAGAAAAAGCATGA 1035 0.4522 MWESIVLTVAATAGNNIGKILQKKGTVILPPLSLKLKVIRAYAFNKIWVIGFLMDIGGALLMLRALSLAPVSVIQPVSGVGLAILSIFSHFYLKEIMNAVDWVGIALAGVGTIGVGAGGEEQEAATLSIFHIPCLAFVVAILFVLLNGGLRICRRHRREQEMMEYDVVEEIIYGLESGILFGMSSVISKMGFLFLEQGFHQLLVPLCIIFSVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASIVSGVLAGMLALGERLPSAPKARLALLLGWLLIITGVILLVGSTRLVKFLSCSSGRTKRSNADKSYSARRPSSLRIREPNPSAVIPATTLNHLLPSASKEKA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03543 344 PANTHER UNCHARACTERIZED 1 341 IPR008521 GO:0015095|GO:0015693|GO:0016021
Aip06g03543 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 285 - -
Aip06g03543 344 Pfam Magnesium transporter NIPA 18 283 IPR008521 GO:0015095|GO:0015693|GO:0016021
Aip06g03543 344 Gene3D - 4 118 - -
Aip06g03543 344 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 341 - -
Aip06g03543 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03543 Aip-Chr6 132891757 132895855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03543 - - ahf:112697651 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03543 06 132891757 132895855 Aip07g03420 07 123977516 123980577 PCT