Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03531 ATGATAGCGTACCTGGAACACTTCGTTCACGGAAACGACGCCGAATCGAGGCAAGACGACACCGACGGCGACGTCGTTTCGTCCCTCGACGGCCTCGAAATCACAACAGCCACCGCCTCCGCCGGCAAAGACTTCGGCGGCACAAAATTCTCGAAGCCGCTCGCAGTCATCCGTCCATCCTCCGCCGTCGACATCGCTCGTGCCGTCCGAGCTGCGGCGGCCACGGCGAATCTCACGGTGGCGGCTCGAGGCAACGGTCACTCCATCAACGGCCAAGCCATGGCGCACAGAGGCTTGGTCCTCGACATGCGCGCCATGGAGAATCACTGTTTTCGTTTCGGTGCTGAAAACGGTAGCGGTGGTTTGCGATACGTCGACGTTCCGGGAGGGGCATTATGGGAAGACGTGTTGAAACGGTGCGTTTCGCAGTTCGGTTTGGCGCCGAGGTCGTGGACGGATTATTTGGGTTTAACGGTTGGGGGAACGCTGTCTAACGGCGGCGTTAGTGGACAGGCGTTCCGTTACGGACCTCAGACGGCAAACGTGACGGAGATGGAGGTTGTTACTGGGAGAGGCGAAACGGTTATCTGCTCTGAAAAGCAGAATTCGGAACTTTTCTTTGCCGCGCTTGGTGGTCTTGGACAGTTCGGTATCATTACCAGAGCTAGAGTCCTTCTTCAACAAGCTCCAGACATGGTGAGGTGGATAAGGGTAGTGTACTCAGAATTTGAGGCGTACACAAGGGACGCGGAGTGGCTAGTGAGTTTGAGAGAAGGAGAAGGTTTTGACTACGTGGAAGGCTTTGTCTTTGTGAACAGCGATGACCCTTGCAACGGCTGGCCCACAGTGCCCATTCACCCTAACCAACGGTTCGACCCGGTTCGTCTCCCTTCCAACGCTGGACCCGTCCTCTATTGCTTAGAACTCGCCCTTCATTATCGTCACTCCCACCATCCTTCAACTCTTGATATGGAAGTAGAGAAATTAGTTGGACGGTTGCGATTCGTGGAGGGTGTAAAGTTCGAAGTGGACGTGAGCTACATGGAATTCTTGCTACGTGTGAAGCGTGTTGAAGAGGAAGCAAAAGTAAAAGGGATATGGGATGCACCTCATCCATGGCTGAACATGTTTATATCAAAGTCCAACATTGCTGAGTTTGATCGTGAAGTCTTCAAGAAAATCATCAAGAATGGTGTTGGTGGCCCCATTTTAGTGTATCCCCTCTTGCGAAGCAAGTAA 1239 0.5335 MIAYLEHFVHGNDAESRQDDTDGDVVSSLDGLEITTATASAGKDFGGTKFSKPLAVIRPSSAVDIARAVRAAAATANLTVAARGNGHSINGQAMAHRGLVLDMRAMENHCFRFGAENGSGGLRYVDVPGGALWEDVLKRCVSQFGLAPRSWTDYLGLTVGGTLSNGGVSGQAFRYGPQTANVTEMEVVTGRGETVICSEKQNSELFFAALGGLGQFGIITRARVLLQQAPDMVRWIRVVYSEFEAYTRDAEWLVSLREGEGFDYVEGFVFVNSDDPCNGWPTVPIHPNQRFDPVRLPSNAGPVLYCLELALHYRHSHHPSTLDMEVEKLVGRLRFVEGVKFEVDVSYMEFLLRVKRVEEEAKVKGIWDAPHPWLNMFISKSNIAEFDREVFKKIIKNGVGGPILVYPLLRSK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03531 412 PANTHER CYTOKININ DEHYDROGENASE 7 12 412 - -
Aip06g03531 412 Gene3D - 10 114 IPR016167 -
Aip06g03531 412 ProSiteProfiles PCMH-type FAD-binding domain profile. 49 229 IPR016166 GO:0071949
Aip06g03531 412 Pfam FAD binding domain 53 198 IPR006094 GO:0050660
Aip06g03531 412 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 230 412 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aip06g03531 412 PANTHER GULONOLACTONE OXIDASE 12 412 - -
Aip06g03531 412 Gene3D - 233 412 IPR016170 -
Aip06g03531 412 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 226 IPR036318 GO:0050660
Aip06g03531 412 Gene3D - 117 231 IPR016169 -
Aip06g03531 412 SUPERFAMILY FAD-linked oxidases, C-terminal domain 230 412 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03531 Aip-Chr6 132682368 132686201 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03531 K00279 - gmx:100816566 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03531 06 132682368 132686201 Aip06g03531 06 132682368 132686201 ECH