Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03528 ATGGGTGAGGCTCCTCAACTTCTCTATGTTAATGGTTTCTCAAAATTTTGCCATGTAACTCAAAAAAACCATGCCAATGGTATTCTTCATAATAATAATAACCACCATGAGTTCTCAAGGTTTGGCCCTGAAAATCAACAAAAGAATGGAAGTAATGGTAACTATGATTCCTCATCATGGTATGAGGAAGTCATTGACGATGATCTCAAATGGTCCTTCAAACTCAATAGGGTGCTCCACAAAGGGGTTAGCAAGTACCAAGACATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCTTTGATGATTGATGGAAAGATGCAGAGTGCTGAATCAGATGAGTTTATTTATCATGAATGCTTGATTCATCCCTCCCTTTTATGCCACCCCAACCCAAAAAAGGTGTTTATTATGGGAGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTCAAACATAAGACAATAGACAAAGTTGTCATGTGCGACATAGACCAGGAGGTGGTAGATTTCTGTAGGAAATATTTGACTGTGAATAGGGAGACATTTTATCACAGGAAGCTTGACCTTGTCATCAATGATGCCAAGGCTGAGTTGGAAAAGAGAAAGGAGAAGTATGATGTGATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTTTATGAGAAAATCTTGAAGCCCAAGCTCAATGATCATGGCATTTTTGTCACCCAGGTAAATTATTATGTGATGGTATATTCCACTCATGTACCATCTTTTGCTGATACATGGGGATGGGTTATGGCTTCTGATGAACCATTATCAATTGGTGCTGAGGAAATGGACAAAAGAATCAAAGCAAGGATAGATGGAGAATTGCTTTATCTAAATGGTGCTTGGTTCCAATCAGCTGCTACCATGAATAAGACTGTTTCACAATCGTTGAAGAACGAAACTCACGTGTACACAGAAGAAAATGCTAGATTTATTCCTGGGCATGGTGTGGCTTATCGTCTCTAA 1026 0.4006 MGEAPQLLYVNGFSKFCHVTQKNHANGILHNNNNHHEFSRFGPENQQKNGSNGNYDSSSWYEEVIDDDLKWSFKLNRVLHKGVSKYQDIALLDTKRFGKALMIDGKMQSAESDEFIYHECLIHPSLLCHPNPKKVFIMGGGEGSAAREALKHKTIDKVVMCDIDQEVVDFCRKYLTVNRETFYHRKLDLVINDAKAELEKRKEKYDVIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDHGIFVTQVNYYVMVYSTHVPSFADTWGWVMASDEPLSIGAEEMDKRIKARIDGELLYLNGAWFQSAATMNKTVSQSLKNETHVYTEENARFIPGHGVAYRL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03528 341 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 58 247 IPR030374 -
Aip06g03528 341 Hamap Polyamine aminopropyltransferase [speE]. 59 318 IPR001045 GO:0003824
Aip06g03528 341 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 59 317 IPR029063 -
Aip06g03528 341 Gene3D Vaccinia Virus protein VP39 111 340 IPR029063 -
Aip06g03528 341 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 248 340 - -
Aip06g03528 341 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 54 248 - -
Aip06g03528 341 CDD AdoMet_MTases 139 248 - -
Aip06g03528 341 MobiDBLite consensus disorder prediction 34 53 - -
Aip06g03528 341 Pfam Spermidine synthase tetramerisation domain 60 111 IPR035246 -
Aip06g03528 341 Pfam Spermine/spermidine synthase domain 114 249 - -
Aip06g03528 341 PANTHER BNAA02G04280D PROTEIN 54 248 - -
Aip06g03528 341 PANTHER BNAA02G04280D PROTEIN 248 340 - -
Aip06g03528 341 Gene3D Spermidine synthase, tetramerisation domain 58 110 IPR037163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03528 Aip-Chr6 132555777 132560526 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03528 K18787 - gmx:100784972 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03528 06 132555777 132560526 Aip06g03528 06 132555777 132560526 ECH