Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03526 ATGAAGAACAACACACTCATAGATCATGAACACTACCACCATAGCAGCAGATTCCTTCACAATCCTTCTTTCTCTTCAACCCTCCTTGACCAAATCTACCGTTCCATTGACCAATCCGAACAACACAATTACACAAATACCCCCAATCACATGAAGACCTTCTTCACACAAACAACTTCAAGAACAGAGAAGAACAAGAAACAGGAACCATCAACAAGAAGCACGTCACGTGACTATGACAATGACGTCACGTGCTTCAGTTCCACGTCACTTTCCTCCGATTCCAGCTCGTCCTCTTCTTCTTCCGCGGGATTTTCATCCTCCGACACGGAGTCAACAAGGCCGTCAAGAACGCGCTCGTCCTCATCGTGCTTCTTGCCTCTGAGGCCGGTGAAGACTAGCGCGTCCTTGAGGGACGAGGAGAAAGGAGACGATGATCGTCGAAAGTTCCACAGCTTTCGCCACGATTTCAAAACCGAATTAGGTGCTCTAATCGGCGGAGATCGTGGCGAAGATGATTATGAATCATTATCCATGAAATCCAAGTCAAGAGCGTTGAAGATCTATAACAATCTCAAGAAGGTGAAGCAACCAATTTCACCCGGTGCTAAGATCACTAGCTTTCTCAACTCGATCTTCGCTACTTCCAAGAAAACCAAGTCCACCAACCATGATATAAAGAATATTTATCAGAATCGGTTACATGAATCAAACGACGCTAGTAAGAACGTGGACAACGATGCAAAAAAGTCAAAGTCAATTCAAACTTCATTGCCTTCTACTTGTTCATTTTCGAGGTCTTGTTTGAGTAAGACTGGTCGGCTACATAGATCAAACGACATTCCAGAAGAAGAAAGAGAAGCCAAGTTAGTTCAAACTTCAACACATTCTTCTCTTTCTTCTTCTAAATCTTGTTTGAGCAAGAGTCTAACTTCCGAAAGGGAAAAGCTTCGCAACGGGACAAAAAGAACGGTTCGATTCTACCCCGTGAGCGTGATTGTGGGTGAAGAAGGAATCAATAATAAAGTTGCCACAAAAACATGGAAGAATAGCAGCAACGTAGAGAAGAGCAAGGTGGTGAAAGAAGCTGCAAGGGAGTTCTTGGAAGAGTACCATAAGAACAAGAACAAGAACAATTTGGTTTCAGAAGCTTTAATGGATTTGCATAAAAATAATAATAACAAAATAAATAATGCAAATCACGACGAAGACGACGACGACGATGACGTGGCAAGTTGTGCAAGTTCGGATCTGTTTGAGCTTGATCATTTGGCTGAGCTTCCTGTGTATGAAACAACTCATGTTTGCACTAATCGTGCCATTGCTAATGGTCTTGCTGTGTAG 1344 0.4286 MKNNTLIDHEHYHHSSRFLHNPSFSSTLLDQIYRSIDQSEQHNYTNTPNHMKTFFTQTTSRTEKNKKQEPSTRSTSRDYDNDVTCFSSTSLSSDSSSSSSSSAGFSSSDTESTRPSRTRSSSSCFLPLRPVKTSASLRDEEKGDDDRRKFHSFRHDFKTELGALIGGDRGEDDYESLSMKSKSRALKIYNNLKKVKQPISPGAKITSFLNSIFATSKKTKSTNHDIKNIYQNRLHESNDASKNVDNDAKKSKSIQTSLPSTCSFSRSCLSKTGRLHRSNDIPEEEREAKLVQTSTHSSLSSSKSCLSKSLTSEREKLRNGTKRTVRFYPVSVIVGEEGINNKVATKTWKNSSNVEKSKVVKEAAREFLEEYHKNKNKNNLVSEALMDLHKNNNNKINNANHDEDDDDDDVASCASSDLFELDHLAELPVYETTHVCTNRAIANGLAV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 8 68 IPR039621 GO:0009734
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 282 446 IPR039621 GO:0009734
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 59 272 IPR039621 GO:0009734
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE B 282 446 - -
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE B 8 68 - -
Aip06g03526 447 PANTHER PROTEIN BIG GRAIN 1-LIKE B 59 272 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 232 252 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 41 61 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 41 125 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 273 310 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 77 125 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 232 249 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 276 291 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 62 76 - -
Aip06g03526 447 MobiDBLite consensus disorder prediction 292 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03526 Aip-Chr6 132540806 132542250 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03526 - - aip:107648546 793.112