Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03478 ATGCAAGAGGAGGAAACTAAGGAAGAAGAACCCTTTGCTGAATCTACAGAGGAAAATGAACAATTTCACCCAACAGAGGGTATTATTTGGGATTGGGTTTGCATTCCAATCAATTGGTTTAGAATGCTTTCAAGGGAAATGCATTGGAGCTTTGTGTTTGGTGTGGTTGTTGTTTATGGAATAAGCCAAGGACTTGGTGGTTCTCTTGCTGGTGTTGGAACAAAGTATTACATGAAAGATGTTCAGAAGGTGCAGCCATCTGAGGCACAGGTTTATGCTGGAATCACATCCATTCCTTGGATTGTTAAGCCTCTTTGGGGACTTCTCACTGATGTTATCCCCATTTTCGGCTACCGGAGGCGACCTTATTTCATTTTTGCTGGTTTCTTAGGAGTAATTGCAATGCTTTTGTTGTCCTTGCATGAAAACCTGCATCTTGTGTTGGCACTTTTGTCATTAACAGCTGGAAGTGCTGGGGCGGCAATAGCAGATGTGACGATTGACGCCTGCGTGGCGCAGAACAGTATCGCTCATCCTTTACTTGCTGCTGATATTCAGAGTTTATGTGCCTTCAGTTCTTCTGTTGGAGCACTATTAGGATTCTCCATTAGTGGTATCTTTGTTCACCTTATAGGCCCTATGGGAGTGTTTGGTTTGATGACTATCCCATCTGGACTTCTAATCTTGCTTGGTTTTCTACTTGACGAGCCCCATATGCATGACTTTTCCTACAGACAGGTGAACCAAAAGTTTATTGATGCTGGCAAGGCAATGTGGTCTACTTTGAAGAGCGAAAGTGTTTGGAGGCCTTGCTTATACATGTATTTATCACTTGCACTGAGTTTGAATATCCTTGAAGGAATGTTCTATTGGTATACAGATTCAAAGGGTGGACCAGCTTTCTCTGAGGAAAGTGTTGGTTTTATATTCTCCATCAGTTCAGTGGGATCCCTTTTGGGTGCAATACTTTACCAATATGCTCTAAAGGATTATGCATTCCGAGACGTTCTCTTCTGGACTCAGTTGCTGTACGGTCTATCGGGTATGCTTGATCTGGTTCTGGTCCTGAGATGGAACCTCAACTTTGGTATACCTGACTATTTCTTTGTTGTGATAGTCGAAAGCATAGCTCAAATGACAAGTAGGCTCAAATGGATGCCTATGCTTGTGCTTAGCTCAAAGCTTTGTCCCTCAGGTATTGAAGGCACCTTCTTTGCCTTGCTTATGTCTATTGATAATGTTGGAGTTCTATCATCATCATGGGCTGGAGGATTTGTGCTCCATATATTTAAGATCACAAGAACACGGTTCGAAAACCTTTGGTTAGCTATTTTGATACGGAATGTTCTGAGACTCAGTCCTCTTTGCATGCTGTTTTTGGTGCCTAGAGCTGATCGGAATGCTCTGATTCTTCCACATGAAAGCTTAGACTCCAAGGTAGCTATTGACCACTCTTTAGAATCCAAGAATGTTGAACTAGTGTCTCTAGTAAGCAGTGTTGAAGGTAAATAG 1512 0.4233 MQEEETKEEEPFAESTEENEQFHPTEGIIWDWVCIPINWFRMLSREMHWSFVFGVVVVYGISQGLGGSLAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVIPIFGYRRRPYFIFAGFLGVIAMLLLSLHENLHLVLALLSLTAGSAGAAIADVTIDACVAQNSIAHPLLAADIQSLCAFSSSVGALLGFSISGIFVHLIGPMGVFGLMTIPSGLLILLGFLLDEPHMHDFSYRQVNQKFIDAGKAMWSTLKSESVWRPCLYMYLSLALSLNILEGMFYWYTDSKGGPAFSEESVGFIFSISSVGSLLGAILYQYALKDYAFRDVLFWTQLLYGLSGMLDLVLVLRWNLNFGIPDYFFVVIVESIAQMTSRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGVLSSSWAGGFVLHIFKITRTRFENLWLAILIRNVLRLSPLCMLFLVPRADRNALILPHESLDSKVAIDHSLESKNVELVSLVSSVEGK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03478 503 Gene3D MFS general substrate transporter like domains 43 449 IPR036259 -
Aip06g03478 503 MobiDBLite consensus disorder prediction 1 15 - -
Aip06g03478 503 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g03478 503 SUPERFAMILY MFS general substrate transporter 51 463 IPR036259 -
Aip06g03478 503 CDD MFS_FBT 61 459 - -
Aip06g03478 503 Pfam BT1 family 272 466 IPR039309 -
Aip06g03478 503 Pfam BT1 family 63 226 IPR039309 -
Aip06g03478 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 14 501 - -
Aip06g03478 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 14 501 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03478 Aip-Chr6 131934237 131938246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03478 - - ccaj:109816000 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03478 06 131934237 131938246 Aip06g03478 06 131934237 131938246 ECH