Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03468 ATGAGTTCTTTGAGCAGAATTGATGAGAAGCCTCATGCTGTGTGCATAGCATACCCAGCACAAGGCCACATAACTCCAATGCTAAAGCTAGCAAAGCTTCTTCACAACAAAGGCTTCCACATAACTTTTGTTAACACTGAATACAATCACAGACGCCTTCTCAGATCAAGAGGACCCGAATCGCTCAAAGGCCTTCCCTCGTTCCGATTCGAAACCATCCCGGACGGCCTTCCTCAGGACCCTGACGACCATGCTGACGTCACTCAGGACGTGCCTTCTCTATGTGAGTCCACAAGAAGGACTTGCTCTCCGCACTTCAAGAAGCTCATTTCCAAGCTCAATTGTGATGGCGGTGTTCCTCCTGTAACTTGCATAGTGTCTGATAGCATCATGAGTTTCAGTGCTGATGCTGCTGAAGAATTTGGCATCCCTTTGGTGATGTTTTGGACTGCAAGTGCTTGTGGATTTGTGTGCTATATGCACTATCATAAACTTGTTCAAAAAGGCTTAATACCACTCAAAGATATGAGCTATGTCACAAATGGATATTTGGAGACTACCCTAGATTGGGTGCCAGGAATTAAAGAAATTCGATTGAGGGATATGCCCAGCTTCCTCAGAACCACAGACCTAAAAGATATTATGCTTGATTTCTTCATAGGAGAGTGTGCACGAGCTCACAAAGCTTCAGCAATAGTAATGAACACATTTGATGCTTTGGAGCATGATGTTTTGGAAGCATGTTCTTCCATTGATAACATGCCTCCTATTTATCCCATTGGTCCCTTGAATTTTCAACTGAACCACTTCAACAACGAGCACTTAAACAAAATTTCATCCAACCTTTGGAAAGAGGATCTAGAGTGTCTTGAATGGCTAGACAAACAAGAGCCCAATTCAGTTGTGTATGTGAACTTTGGTAGCATCACAACTATGACCAATGAAAACTTAATAGAGTTTGCTTGGGGACTTGCCAATAGCAACAAAAAATTCTTTTGGGTAATTAGGCCAGATCTTGTGGCTGGTGAAAATGCTGTGTTACCTCCTGAATTTTTGGAAGTGACAAAAATTAGAGGCATGTTATCAAATTGGTGTCCCCAAGAACAAGTTTTGGCTCACCCTTCAATTGGGGTGTTTTTGACACATAGTGGTTGGAACTCAACATTGGAAAGTGTGTGTGGTGGTGTGCCCATGATATGTTGGCCCTTCTTTGCTGAGCAACAAACCAATTGTAGGTTTTGTAATAAGGAGTGGGGAAATGGGTTGGAGATAGAATATGTTAGCAGGGAGAAAATTGAGAGCCTTGTGAGGGAGTCAATGGATGGAGAGAAGGGTCAAGATATGAGACAAAAGGCTTTGCAATGGAAGAAATTAGCCAAGGATGCTGCTTCTGCCCCGGATGGATCCTCATTTCAGAATCTAGAGAAGGTGCTTCATCAAGTTCTATTGAACAATTTCACTACTACAAAGTAG 1473 0.427 MSSLSRIDEKPHAVCIAYPAQGHITPMLKLAKLLHNKGFHITFVNTEYNHRRLLRSRGPESLKGLPSFRFETIPDGLPQDPDDHADVTQDVPSLCESTRRTCSPHFKKLISKLNCDGGVPPVTCIVSDSIMSFSADAAEEFGIPLVMFWTASACGFVCYMHYHKLVQKGLIPLKDMSYVTNGYLETTLDWVPGIKEIRLRDMPSFLRTTDLKDIMLDFFIGECARAHKASAIVMNTFDALEHDVLEACSSIDNMPPIYPIGPLNFQLNHFNNEHLNKISSNLWKEDLECLEWLDKQEPNSVVYVNFGSITTMTNENLIEFAWGLANSNKKFFWVIRPDLVAGENAVLPPEFLEVTKIRGMLSNWCPQEQVLAHPSIGVFLTHSGWNSTLESVCGGVPMICWPFFAEQQTNCRFCNKEWGNGLEIEYVSREKIESLVRESMDGEKGQDMRQKALQWKKLAKDAASAPDGSSFQNLEKVLHQVLLNNFTTTK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03468 490 CDD GT1_Gtf-like 11 466 IPR002213 GO:0008194
Aip06g03468 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 67 444 IPR002213 GO:0008194
Aip06g03468 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 56 - -
Aip06g03468 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 56 482 - -
Aip06g03468 490 Gene3D Glycogen Phosphorylase B; 12 464 - -
Aip06g03468 490 Gene3D Glycogen Phosphorylase B; 278 461 - -
Aip06g03468 490 ProSitePatterns UDP-glycosyltransferases signature. 364 407 IPR035595 -
Aip06g03468 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 474 - -
Aip06g03468 490 PANTHER GLYCOSYLTRANSFERASE 7 56 - -
Aip06g03468 490 PANTHER GLYCOSYLTRANSFERASE 56 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03468 Aip-Chr6 131857994 131860763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03468 8 489 Glycosyltransferase AT1G22380 56.907 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03468 - - gmx:100784251 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03468 06 131857994 131860763 Aip06g03468 06 131857994 131860763 ECH